Weekly testing and recalibration of test timings #4
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name: Weekly testing and recalibration of test timings | |
on: | |
schedule: | |
- cron: "5 3 * * 2" | |
jobs: | |
calibrate-timings: | |
runs-on: ubuntu-latest | |
permissions: | |
pull-requests: write | |
contents: write | |
steps: | |
- name: install | |
uses: khanlab/actions/.github/actions/[email protected] | |
id: setup | |
with: | |
python-version: "3.8" | |
install-library: true | |
- name: build docker test container | |
uses: ./.github/actions/build-test-container | |
with: | |
python-version: ${{ steps.setup.outputs.python-version }} | |
load: true | |
- name: Count current number of tests | |
id: count | |
run: | | |
echo "NUM=$( | |
poetry run pytest --collect-only -q | head -n -2 | wc -l | |
)" >> "$GITHUB_OUTPUT" | |
- name: Count number of timed tests | |
id: timed-count | |
run: | | |
echo "NUM=$(jq 'keys | length' .test_durations)" >> "$GITHUB_OUTPUT" | |
- name: Test with pytest | |
if: ${{ steps.count.outputs.NUM }} != ${{ steps.timed-count.outputs.NUM }} | |
env: | |
HYPOTHESIS_PROFILE: pr | |
run: >- | |
poetry run pytest -n auto --store-durations --clean-durations | |
--doctest-modules --ignore=docs | |
--ignore=snakebids/project_template --benchmark-disable | |
- name: remove spuriously include "Dancefile.inject" | |
run: git clean -df | |
- name: Check if there are changes | |
id: changes | |
run: | | |
echo "changed=$(git diff-files --quiet && echo 0 || echo 1)" >> "$GITHUB_OUTPUT" | |
- name: debug outputs | |
run: | | |
echo "Current # tests: ${{ steps.count.outputs.NUM }}" | |
echo "Current # timed tests: ${{ steps.timed-count.outputs.NUM }}" | |
echo "Changes?: ${{ steps.changes.outputs.changed }}" | |
- name: Create PR | |
if: steps.changes.outputs.changed == 1 | |
uses: peter-evans/create-pull-request@v5 | |
with: | |
commit-message: Update test timings file | |
branch: maint/update-test-timings | |
title: Merge updated test timings | |
labels: maintenance | |
body: > | |
The number of tests has changed since the last generated test-timings | |
file. This PR contains an automatically regenerated file. | |
build-cache-env: | |
runs-on: ubuntu-latest | |
strategy: | |
matrix: | |
python-version: ["3.8", "3.9", "3.10", "3.11", "3.12"] | |
steps: | |
- uses: khanlab/actions/.github/actions/[email protected] | |
id: setup | |
with: | |
python-version: ${{ matrix.python-version }} | |
cache-key: pypi | |
install-deps-only: dev | |
install-library: false | |
- name: build docker test container | |
uses: ./.github/actions/build-test-container | |
with: | |
python-version: ${{ steps.setup.outputs.python-version }} | |
load: true | |
- name: install lib | |
run: poetry run pip install . | |
test: | |
runs-on: ubuntu-latest | |
needs: [ 'build-cache-env' ] | |
strategy: | |
matrix: | |
python-version: ['3.8', '3.9', '3.10', '3.11', '3.12'] | |
split: ['1', '2', '3', '4', '5'] | |
fail-fast: false | |
steps: | |
- uses: khanlab/actions/.github/actions/[email protected] | |
id: setup | |
with: | |
python-version: ${{ matrix.python-version }} | |
cache-key: nightly | |
install-deps-only: dev | |
install-library: false | |
- name: install lib | |
run: poetry run pip install . | |
- name: build docker test container | |
uses: ./.github/actions/build-test-container | |
with: | |
python-version: ${{ steps.setup.outputs.python-version }} | |
load: true | |
- name: Test with pytest | |
env: | |
HYPOTHESIS_PROFILE: pr | |
run: >- | |
poetry run pytest -n auto --splits 5 --group ${{ matrix.split }} | |
--doctest-modules --ignore=docs | |
--ignore=snakebids/project_template --benchmark-disable |