Skip to content

Commit

Permalink
Update index.html
Browse files Browse the repository at this point in the history
Added details about the CTIMS components
  • Loading branch information
jagnathan authored Oct 10, 2024
1 parent 9f88f88 commit 15865e9
Showing 1 changed file with 2 additions and 1 deletion.
3 changes: 2 additions & 1 deletion docs/index.html
Original file line number Diff line number Diff line change
Expand Up @@ -51,7 +51,8 @@ <h2 class="section-heading text-uppercase">About</h2>
<h3 class="section-subheading text-muted"></h3>
</div>
<div class="row">
<div class="col-lg-8 mx-auto text-center"><p class="large text-muted"> Clinical Trial Markup Language (CTML) is an open standard that was created by DFCI and Harvard Medical School. Creating CTML files in YAML format files manually was very time consuming and prone to typos and errors. We came up with the idea of a software that can create CTML files in a user friendly manner. The new CTIMS software enables users to easily create CTML files. As part of the UHN CDI Grand challenge 2022, CTIMS proposal was selected as the Prize Winner. Pugh Lab and CDI teams collaborated to create CTIMS, while taking into consideration input from multiple users and stakeholders. CTIMS follows strict UHN Security guidelines. </p></div>
<div class="col-lg-8 mx-auto text-center"><p class="large text-muted"> Clinical Trial Markup Language (CTML) is an open standard that was created by DFCI and Harvard Medical School. Creating CTML files in YAML format files manually was very time consuming and prone to typos and errors. We came up with the idea of a software that can create CTML files in a user friendly manner. The new CTIMS software enables users to easily create CTML files. As part of the UHN CDI Grand challenge 2022, CTIMS proposal was selected as the Prize Winner. Pugh Lab and CDI teams collaborated to create CTIMS, while taking into consideration input from multiple users and stakeholders. CTIMS follows strict UHN Security guidelines. </p>
<p> CTIMS has four components namely Assembler, Editor, Matcher and Viewer. The Assembler converts study data from cBioPortal format to MatchMiner format, either from locally saved cBioPortal study files or by retrieving data via the cBioPortal API. CTIMS Editor helps to create CTMLs efficiently and store them in a database. CTIMS Editor integrates with MatchMiner via MatchMiner API. CTIMS Matcher is the DFCI MatchMiner Engine. DFCI MatchMiner uses CTML files to find patient trial matches. CTIMS Viewer stores the match results for data analysis and visualization. CTIMS Viewer API supports integration with cBioPortal so that the trial match results can be viewed in cBioPortal along with patient data. CTIMS supports Authentication and Authorization using Keycloak. </p></div>
</div>
</div>
</section>
Expand Down

0 comments on commit 15865e9

Please sign in to comment.