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Previously, I only updated the README. Then I realised that PKG-INFO needed to change too and probably these other files too.
There's one left at https://github.com/prody/ProDy/blob/main/docs/devel/website.rst, which I don't know what to do with.
https://github.com/prody/ProDy/blob/main/docs/devel/website.rst?plain=1#L17
First log in to the ProDy webserver (prody.csb.pitt.edu) then run the following::
https://github.com/prody/ProDy/blob/main/docs/devel/website.rst?plain=1#L37
http://prody.csb.pitt.edu/test_prody/_build/html/ in your web browser.