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fix links in readme #1925

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merged 2 commits into from
Aug 16, 2024
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fix links in readme #1925

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36d8418
fix links in readme
jamesmkrieger Jul 31, 2024
60fe447
Merge branch 'main' of github.com:prody/ProDy into readme
jamesmkrieger Aug 14, 2024
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21 changes: 11 additions & 10 deletions README.rst
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Original file line number Diff line number Diff line change
@@ -1,5 +1,5 @@
.. image:: https://img.shields.io/travis/prody/ProDy.svg
:target: http://travis-ci.org/#!/prody/ProDy
.. image:: https://img.shields.io/github/actions/workflow/status/prody/prody/main.yml
:target: https://github.com/prody/ProDy/actions/workflows/main.yml

.. image:: https://img.shields.io/pypi/v/ProDy.svg
:target: https://pypi.org/project/ProDy/
Expand All @@ -8,7 +8,7 @@
:target: https://github.com/prody/ProDy/commits/master

.. image:: https://img.shields.io/pypi/dm/ProDy.svg
:target: http://prody.csb.pitt.edu/downloads/
:target: http://www.bahargroup.org/prody/downloads/

SYNOPSIS
--------
Expand Down Expand Up @@ -78,23 +78,23 @@ GETTING PRODY
You can run ProDy on all major platforms. For download and installation
instructions see:

* http://prody.csb.pitt.edu/downloads
* http://www.bahargroup.org/prody/downloads/


DOCUMENTATION
-------------

* Homepage: http://prody.csb.pitt.edu/
* Homepage: http://www.bahargroup.org/prody/

* Tutorials: http://prody.csb.pitt.edu/tutorials
* Tutorials: http://www.bahargroup.org/prody/tutorials

* Reference: http://prody.csb.pitt.edu/manual
* Reference: http://www.bahargroup.org/prody/manual

* Applications: http://prody.csb.pitt.edu/manual/apps
* Applications: http://www.bahargroup.org/prody/manual/apps

* NMWiz GUI: http://prody.csb.pitt.edu/nmwiz
* NMWiz GUI: http://www.bahargroup.org/prody/nmwiz

* Changes: http://prody.csb.pitt.edu/manual/release
* Changes: http://www.bahargroup.org/prody/manual/release

See also https://github.com/prody/ProDy-website for latest versions.

Expand Down Expand Up @@ -136,6 +136,7 @@ is used to perform calulations. The precompiled versions for Python 2.7,
3.8, 3.9, and 3.10 are availabe in prody/proteins/hpbmodule. The user can
choose the correct version of hpb.so and copy to the prody/proteins or
local directory.

C++ code of hpb.so was developed by Xin Cao and Fortran code by Xin Cao,
Michelle H. Hummel, Bihua Yu, and Evangelos A. Coutsias (License in
prody/proteins/hpbmodule folder). Details of the method can be found
Expand Down
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