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Merge pull request #1437 from jamesmkrieger/v2.0.1_release_changes
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V2.0.1 release changes
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jamesmkrieger authored Dec 21, 2021
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:local:

2.0.1 (Dec 20, 2021)
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**New Features**:

* Added :function:`.calcRWSIP` for comparing sets of modes

* New methods to convert :class:`.Atom`, :class:`.Atomic` and :class:`.EMDMAP`
to TEMPy objects, allowing calculations such as cross-correlation coefficient (CCC)
to EM maps.

* Added :func:`.calcDynamicFlexibilityIndex` and :func:`.calcDynamicCouplingIndex`
for further interpretation of PRS results.

* Reinstated the option of using forces in PRS as in ProDy v1.8 (`turbo=**False**`)

* Added GitHub Actions Continuous Integration in place of Travis.

**Bug Fixes and Improvements**:

* Compatibility and bug fixes for various functions, including pyparsing for selections.

* Extended :class:`.AdaptiveANM` to work with other models including explicit membrane
ANM, :class:`.exANM`.

* Improved capabilities for fetching and parsing mmCIF and EMD files.

* Improved handling of residue and serial numbers including hexadecimal and hybrid36 formats.

* Consistency fixes.

* More non-standard amino acids (MEN, CSB, CME).

**Full Changelog**: https://github.com/prody/ProDy/compare/v2.0...v2.0.1

2.0 (Dec 30, 2020)
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