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fixing typos
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karolamik13 committed Nov 12, 2024
1 parent 9b79bd7 commit 6e342c4
Showing 1 changed file with 3 additions and 2 deletions.
5 changes: 3 additions & 2 deletions prody/proteins/interactions.py
Original file line number Diff line number Diff line change
Expand Up @@ -3330,6 +3330,7 @@ def extractMultiModelPDB(multimodelPDB, **kwargs):
:arg folder_name: The name of the folder to which PDBs will be extracted
:type folder_name: str
"""

import os

folder_name = kwargs.pop('folder_name', 'struc_homologs')
Expand Down Expand Up @@ -3389,7 +3390,7 @@ def runFoldseek(pdb_file, chain, **kwargs):
:type tm_threshold: float
:arg database_folder: Folder with the database
by default '~/Donwload/foldseek/pdb'
by default '~/Downloads/foldseek/pdb'
To download the database use: 'foldseek databases PDB pdb tmp' in the console
:type database_folder: str
"""
Expand All @@ -3399,7 +3400,7 @@ def runFoldseek(pdb_file, chain, **kwargs):
import re
import sys

database_folder = kwargs.pop('database_folder', '~/Donwload/foldseek/pdb')
database_folder = kwargs.pop('database_folder', '~/Downloads/foldseek/pdb')
coverage_threshold = kwargs.pop('coverage_threshold', 0.3)
tm_threshold = kwargs.pop('tm_threshold', 0.5)

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