[DOC] Update computing section #143
Workflow file for this run
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name: Render quarto website | |
on: | |
push: | |
branches: [ "main" ] | |
pull_request: | |
branches: [ "main" ] | |
concurrency: | |
group: ${{ github.workflow }}-${{ github.ref }} | |
cancel-in-progress: true | |
jobs: | |
render_site: | |
runs-on: ubuntu-latest | |
steps: | |
- uses: actions/checkout@v3 | |
- uses: actions/setup-python@v4 | |
with: | |
python-version: '3.10' | |
- name: Install GDebi first | |
run: sudo apt-get install gdebi-core | |
- name: Download the deb file | |
run: sudo curl -LO https://quarto.org/download/latest/quarto-linux-amd64.deb | |
- name: Install the deb file | |
run: sudo apt-get install -y ./quarto-linux-amd64.deb | |
- name: Verify Install | |
run: /usr/local/bin/quarto check | |
- name: Install quarto deps | |
run: pip install nbformat nbclient ipykernel jupyter tomli biopython scholarly crossrefapi toml pymongo orcid | |
- name: Install academicdb | |
run: pip install academicdb | |
- name: decrypt config file | |
run: ./decrypt_secret.sh | |
continue-on-error: true | |
env: | |
CONFIG_SECRET_PASSPHRASE: ${{ secrets.CONFIG_SECRET_PASSPHRASE }} | |
- name: decrypt pybliometrics config file | |
run: ./decrypt_pyb_config.sh | |
continue-on-error: true | |
env: | |
TOKEN_PASSCODE: ${{ secrets.TOKEN_PASSCODE }} | |
- name: Allow Python code to fail on forked PRs | |
run: | | |
if [ "$REPO_OWNER" != "poldracklab" ]; then | |
echo "POLDRACKLAB_IGNORE_FAILURE=1" | tee -a $GITHUB_ENV | |
fi | |
env: | |
REPO_OWNER: ${{ github.event.pull_request.head.repo.owner.login }} | |
- name: build site | |
run: quarto render . | |
- name: Deploy | |
if: github.event_name == 'push' | |
uses: JamesIves/github-pages-deploy-action@v4 | |
with: | |
folder: docs # The folder the action should deploy. |