Build modules in new project folder on Frontier #119
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| #!/bin/bash | ||
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| export MY_CLUSTER=crusher | ||
| export PROJ_DIR=/autofs/nccs-svm1_proj/eng145 | ||
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| module reset | ||
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| Original file line number | Diff line number | Diff line change |
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| @@ -1,4 +1,4 @@ | ||
| module use -a /lustre/orion/eng145/proj-shared/nkouk/spack-install/modules/linux-sles15-zen3 | ||
| # gmake@=4.4.1%clang@=14.0.0-rocm5.2.0-mixed~guile build_system=generic arch=linux-sles15-zen3 | ||
| module load gmake/4.4.1-clang-14.0.0-rocm5.2.0-mixed-7vcngsz | ||
| # pkgconf@=1.9.5%clang@=14.0.0-rocm5.2.0-mixed build_system=autotools arch=linux-sles15-zen3 | ||
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@@ -22,21 +22,15 @@ module load cmake/3.20.6-clang-14.0.0-rocm5.2.0-mixed-lilujjv | |
| # blt@=0.4.1%clang@=14.0.0-rocm5.2.0-mixed build_system=generic arch=linux-sles15-zen3 | ||
| module load blt/0.4.1-clang-14.0.0-rocm5.2.0-mixed-pihruyq | ||
| # hip@=5.2.0%clang@=14.0.0-rocm5.2.0-mixed~cuda+rocm build_system=cmake build_type=Release generator=make patches=959d1fe,c2ee21c arch=linux-sles15-zen3 | ||
| module load hip/5.2.0-clang-14.0.0-rocm5.2.0-mixed-6ftqihk | ||
| # hsa-rocr-dev@=5.2.0%clang@=14.0.0-rocm5.2.0-mixed~asan+image+shared build_system=cmake build_type=Release generator=make patches=9267179 arch=linux-sles15-zen3 | ||
| module load hsa-rocr-dev/5.2.0-clang-14.0.0-rocm5.2.0-mixed-p6fvpym | ||
| # llvm-amdgpu@=5.2.0%clang@=14.0.0-rocm5.2.0-mixed~link_llvm_dylib~llvm_dylib~openmp+rocm-device-libs build_system=cmake build_type=Release generator=ninja patches=a08bbe1 arch=linux-sles15-zen3 | ||
| module load llvm-amdgpu/5.2.0-clang-14.0.0-rocm5.2.0-mixed-7g3i4ov | ||
| # camp@=0.2.3%clang@=14.0.0-rocm5.2.0-mixed~cuda~ipo~openmp+rocm~tests amdgpu_target=gfx90a build_system=cmake build_type=Release generator=make arch=linux-sles15-zen3 | ||
| module load camp/0.2.3-clang-14.0.0-rocm5.2.0-mixed-5hqx2ao | ||
| # cray-mpich@=8.1.25%clang@=14.0.0-rocm5.2.0-mixed+wrappers build_system=generic arch=linux-sles15-zen3 | ||
| module load cray-mpich/8.1.25-clang-14.0.0-rocm5.2.0-mixed-qd6s47h | ||
| # hipblas@=5.2.0%clang@=14.0.0-rocm5.2.0-mixed~cuda+rocm amdgpu_target=auto build_system=cmake build_type=Release generator=make arch=linux-sles15-zen3 | ||
| module load hipblas/5.2.0-clang-14.0.0-rocm5.2.0-mixed-pz2pdk4 | ||
| # hipfft@=5.2.0%clang@=14.0.0-rocm5.2.0-mixed~cuda+rocm amdgpu_target=auto build_system=cmake build_type=Release generator=make arch=linux-sles15-zen3 | ||
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@@ -52,13 +46,19 @@ module load rocrand/5.2.0-clang-14.0.0-rocm5.2.0-mixed-nwexus7 | |
| # rocthrust@=5.2.0%clang@=14.0.0-rocm5.2.0-mixed amdgpu_target=auto build_system=cmake build_type=Release generator=make arch=linux-sles15-zen3 | ||
| module load rocthrust/5.2.0-clang-14.0.0-rocm5.2.0-mixed-3upg7wr | ||
| # ginkgo@=1.5.0.glu_experimental%clang@=14.0.0-rocm5.2.0-mixed~cuda~develtools~full_optimizations~hwloc~ipo~mpi~openmp+rocm+shared~sycl amdgpu_target=gfx90a build_system=cmake build_type=Release generator=make patches=ba0956e arch=linux-sles15-zen3 | ||
| module load ginkgo/1.5.0.glu_experimental-clang-14.0.0-rocm5.2.0-mixed-6bembpq | ||
| # gmake@=4.4.1%gcc@=12.2.0-mixed~guile build_system=generic arch=linux-sles15-zen3 | ||
| module load gmake/4.4.1-gcc-12.2.0-mixed-svg2oxk | ||
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There was a problem hiding this comment. We need Ginkgo >= 1.7. I think There was a problem hiding this comment. I am not aware that HiOp's interface to [email protected] has been updated. There was a problem hiding this comment. It has not. However, There was a problem hiding this comment. Perhaps we should build Ginkgo >= 1.7, but build HiOp without Ginkgo support enabled. This will at least create an environment in which developers could complete HiOp interface updates. Just my $0.02 tip. |
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| # openblas@=0.3.20%gcc@=12.2.0-mixed~bignuma~consistent_fpcsr~ilp64+locking+pic+shared build_system=makefile patches=9f12903 symbol_suffix=none threads=none arch=linux-sles15-zen3 | ||
| module load openblas/0.3.20-gcc-12.2.0-mixed-lkwa4l7 | ||
| # coinhsl@=2019.05.21%gcc@=12.2.0-mixed+blas build_system=autotools arch=linux-sles15-zen3 | ||
| module load coinhsl/2019.05.21-gcc-12.2.0-mixed-4lf6df7 | ||
| # magma@=2.6.2%clang@=14.0.0-rocm5.2.0-mixed~cuda+fortran~ipo+rocm+shared amdgpu_target=gfx90a build_system=cmake build_type=Release generator=make arch=linux-sles15-zen3 | ||
| module load magma/2.6.2-clang-14.0.0-rocm5.2.0-mixed-5v4sbqv | ||
| # metis@=5.1.0%clang@=14.0.0-rocm5.2.0-mixed~gdb~int64~ipo~real64+shared build_system=cmake build_type=Release generator=make patches=4991da9,93a7903 arch=linux-sles15-zen3 | ||
| module load metis/5.1.0-clang-14.0.0-rocm5.2.0-mixed-3loietj | ||
| # raja@=0.14.0%clang@=14.0.0-rocm5.2.0-mixed~cuda~examples~exercises~ipo~openmp~plugins+rocm+shared~tests amdgpu_target=gfx90a build_system=cmake build_type=Release generator=make arch=linux-sles15-zen3 | ||
| module load raja/0.14.0-clang-14.0.0-rocm5.2.0-mixed-plistg5 | ||
| # libiconv@=1.17%clang@=14.0.0-rocm5.2.0-mixed build_system=autotools libs=shared,static arch=linux-sles15-zen3 | ||
| module load libiconv/1.17-clang-14.0.0-rocm5.2.0-mixed-gryio4w | ||
| # diffutils@=3.9%clang@=14.0.0-rocm5.2.0-mixed build_system=autotools arch=linux-sles15-zen3 | ||
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@@ -98,14 +98,14 @@ module load mpfr/4.2.0-clang-14.0.0-rocm5.2.0-mixed-k6y6ufe | |
| # suite-sparse@=5.13.0%clang@=14.0.0-rocm5.2.0-mixed~cuda~graphblas~openmp+pic build_system=generic arch=linux-sles15-zen3 | ||
| module load suite-sparse/5.13.0-clang-14.0.0-rocm5.2.0-mixed-vfmchqd | ||
| # umpire@=6.0.0%clang@=14.0.0-rocm5.2.0-mixed+c~cuda~device_alloc~deviceconst~examples~fortran~ipo~numa~openmp+rocm+shared amdgpu_target=gfx90a build_system=cmake build_type=Release generator=make tests=none arch=linux-sles15-zen3 | ||
| module load umpire/6.0.0-clang-14.0.0-rocm5.2.0-mixed-q3vler4 | ||
| # hiop@=develop%clang@=14.0.0-rocm5.2.0-mixed~cuda~deepchecking+ginkgo~ipo~jsrun+kron+mpi+raja+rocm~shared+sparse amdgpu_target=gfx90a build_system=cmake build_type=Release generator=make arch=linux-sles15-zen3 | ||
| module load hiop/develop-clang-14.0.0-rocm5.2.0-mixed-jxs7pn7 | ||
| # ipopt@=3.12.10%clang@=14.0.0-rocm5.2.0-mixed+coinhsl~debug~metis~mumps build_system=autotools arch=linux-sles15-zen3 | ||
| module load ipopt/3.12.10-clang-14.0.0-rocm5.2.0-mixed-di6sy6h | ||
| # python@=3.9.12%clang@=14.0.0-rocm5.2.0-mixed+bz2+crypt+ctypes+dbm~debug+libxml2+lzma~nis~optimizations+pic+pyexpat+pythoncmd+readline+shared+sqlite3+ssl~tkinter+uuid+zlib build_system=generic patches=0d98e93,4c24573,ebdca64,f2fd060 arch=linux-sles15-zen3 | ||
| module load python/3.9.12-clang-14.0.0-rocm5.2.0-mixed-rmdxnw5 | ||
| # petsc@=3.20.2%clang@=14.0.0-rocm5.2.0-mixed~X~batch~cgns~complex~cuda~debug+double~exodusii~fftw+fortran~giflib~hdf5~hpddm~hwloc~hypre~int64~jpeg~knl~kokkos~libpng~libyaml~memkind~metis~mkl-pardiso~mmg~moab~mpfr+mpi~mumps~openmp~p4est~parmmg~ptscotch~random123~rocm~saws~scalapack+shared~strumpack~suite-sparse~superlu-dist~sycl~tetgen~trilinos~valgrind~zoltan build_system=generic clanguage=C memalign=none arch=linux-sles15-zen3 | ||
| module load petsc/3.20.2-clang-14.0.0-rocm5.2.0-mixed-lnhejpn | ||
| # exago@=develop%clang@=14.0.0-rocm5.2.0-mixed~cuda+hiop~ipo+ipopt+logging+mpi~python+raja+rocm amdgpu_target=gfx90a build_system=cmake build_type=Release dev_path=/lustre/orion/scratch/nkouk/eng145/ExaGO generator=make arch=linux-sles15-zen3 | ||
| ## module load exago/develop-clang-14.0.0-rocm5.2.0-mixed-stynmti | ||
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| Original file line number | Diff line number | Diff line change |
|---|---|---|
| @@ -1,3 +1,3 @@ | ||
| module use -a /lustre/orion/eng145/proj-shared/nkouk/spack-install/modules/linux-sles15-zen3 | ||
| # exago@=develop%clang@=14.0.0-rocm5.2.0-mixed~cuda+hiop~ipo+ipopt+logging+mpi~python+raja+rocm amdgpu_target=gfx90a build_system=cmake build_type=Release dev_path=/lustre/orion/scratch/nkouk/eng145/ExaGO generator=make arch=linux-sles15-zen3 | ||
| module load exago/develop-clang-14.0.0-rocm5.2.0-mixed-stynmti | ||
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There was a problem hiding this comment. Could we install these modules in "world shared" folder? There was a problem hiding this comment. I'll make a new pull request. |
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| Original file line number | Diff line number | Diff line change |
|---|---|---|
| @@ -1,6 +1,6 @@ | ||
| #!/bin/bash | ||
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| #SBATCH -A ENG145 | ||
| #SBATCH -p batch | ||
| #SBATCH -t 100 | ||
| #SBATCH -N 1 | ||
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We need ROCm >= 5.6. Also, I suggest using Frontier modules rather than building our own.
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See #89 regarding rocm >=5.6.
For the
rocmmodules, I am using the system modules (see https://github.com/pnnl/ExaGO/blob/nicholson/frontier-eng145/buildsystem/spack/crusher/spack.yaml#L208), but Spack likes to add a wrapper to it.There was a problem hiding this comment.
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Thanks for clarifying these are Spack wrappers.
As for #89, this looks like a bug in PETSc Spack package.
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There is a workaround for the PETSc error. I am more concerned about the failing tests, especially in Debug mode.