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# Deploy `tljh_repo2docker` as a hub-managed service | ||
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A guide to help you add `tljh_repo2docker` service to a JupyterHub deployment from scratch. | ||
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> [!NOTE] | ||
> In this guide, we assume you have experience with setting up JupyterHub on Kubernetes. We will use [Zero to JupyterHub](https://z2jh.jupyter.org/en/latest/index.html#zero-to-jupyterhub-with-kubernetes) as the base JupyterHub deployment. | ||
## Create a new JupyterHub docker image. | ||
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Since we are going to use `tljh_repo2docker` as a hub-managed service, the python package needs to be installed into the base JupyterHub image. We will build a custom image based on the [zero-to-jupyterhub image](https://quay.io/repository/jupyterhub/k8s-hub). Here is a minimal docker file to build the custom image: | ||
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```docker | ||
FROM quay.io/jupyterhub/k8s-hub:3.3.7 | ||
USER root | ||
RUN python3 -m pip install "tljh-repo2docker>=2.0.0a1" | ||
USER jovyan | ||
``` | ||
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Then you can build and push the image to the registry of your choice: | ||
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```bash | ||
docker build . -t k8s-hub-tljh:xxx | ||
``` | ||
## Installing JupyterHub and tljh_repo2docker with Helm chart. | ||
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With a Kubernetes cluster available and Helm installed, we can install our custom JupyterHub image in the Kubernetes cluster using the JupyterHub Helm chart. You can find a chart template at [example/tljh_r2d](example/tljh_r2d). | ||
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### Using local build-backend via `repo2docker`. | ||
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To build images using the local docker engine, modify the `value.yaml` file with the following content: | ||
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```yaml | ||
# values.yaml | ||
jupyterhub: | ||
enabled: true | ||
hub: | ||
image: | ||
name: k8s-hub-tljh | ||
tag: xxx | ||
extraFiles: | ||
my_jupyterhub_config: | ||
mountPath: /usr/local/etc/jupyterhub/jupyterhub_config.d/jupyterhub_config.py | ||
``` | ||
Now install the chart with the JupyterHub config from `jupyterhub_config_local.py`: | ||
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```bash | ||
helm upgrade --install tljh . --wait --set-file jupyterhub.hub.extraFiles.my_jupyterhub_config.stringData=./jupyterhub_config_local.py | ||
``` | ||
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### Using binderhub service as build-backend. | ||
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To use binderhub as the build-backend, you need to deploy [binderhub service](https://binderhub-service.readthedocs.io/en/latest/tutorials/install.html) and config `tljh-repo2docker` to use this service. Here is an example of the configuration: | ||
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```yaml | ||
#values.yaml | ||
jupyterhub: | ||
enabled: true | ||
hub: | ||
image: | ||
name: k8s-hub-binhderhub-tljh | ||
tag: xxx | ||
config: | ||
BinderSpawner: | ||
auth_enabled: true | ||
extraFiles: | ||
my_jupyterhub_config: | ||
mountPath: /usr/local/etc/jupyterhub/jupyterhub_config.d/jupyterhub_config.py | ||
binderhub-service: | ||
config: | ||
BinderHub: | ||
base_url: /services/binder | ||
use_registry: true | ||
image_prefix: "" | ||
enable_api_only_mode: true | ||
buildPodsRegistryCredentials: | ||
server: "https://index.docker.io/v1/" # Set image registry for pushing images | ||
``` | ||
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Now install the chart with the JupyterHub config from `jupyterhub_config_binderhub.py` and with image registry credentials passed via command line: | ||
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```bash | ||
helm upgrade --install tljh . --wait --set-file jupyterhub.hub.extraFiles.my_jupyterhub_config.stringData=./jupyterhub_config_binderhub.py --set binderhub-service.buildPodsRegistryCredentials.password=xxx --set binderhub-service.buildPodsRegistryCredentials.username=xxx | ||
``` | ||
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Now you should have a working instance of JupyterHub with `tljh_repo2docker` service deployed. |
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FROM quay.io/jupyterhub/k8s-hub:3.3.7 | ||
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USER root | ||
RUN python3 -m pip install "tljh-repo2docker>=2.0.0a1" | ||
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USER jovyan |
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# Patterns to ignore when building packages. | ||
# This supports shell glob matching, relative path matching, and | ||
# negation (prefixed with !). Only one pattern per line. | ||
.DS_Store | ||
# Common VCS dirs | ||
.git/ | ||
.gitignore | ||
.bzr/ | ||
.bzrignore | ||
.hg/ | ||
.hgignore | ||
.svn/ | ||
# Common backup files | ||
*.swp | ||
*.bak | ||
*.tmp | ||
*.orig | ||
*~ | ||
# Various IDEs | ||
.project | ||
.idea/ | ||
*.tmproj | ||
.vscode/ |
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dependencies: | ||
- name: jupyterhub | ||
repository: https://hub.jupyter.org/helm-chart/ | ||
version: 3.3.7 | ||
- name: binderhub-service | ||
repository: https://2i2c.org/binderhub-service | ||
version: 0.1.0-0.dev.git.201.h161a088 | ||
digest: sha256:db05fc18bdb7cbcf06ea8881ed72391383ed0524def10d76b62b9d1880abac51 | ||
generated: "2024-05-02T20:34:11.347162518+02:00" |
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apiVersion: v2 | ||
name: tljh_r2d | ||
description: A Helm chart for Kubernetes | ||
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# A chart can be either an 'application' or a 'library' chart. | ||
# | ||
# Application charts are a collection of templates that can be packaged into versioned archives | ||
# to be deployed. | ||
# | ||
# Library charts provide useful utilities or functions for the chart developer. They're included as | ||
# a dependency of application charts to inject those utilities and functions into the rendering | ||
# pipeline. Library charts do not define any templates and therefore cannot be deployed. | ||
type: application | ||
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# This is the chart version. This version number should be incremented each time you make changes | ||
# to the chart and its templates, including the app version. | ||
# Versions are expected to follow Semantic Versioning (https://semver.org/) | ||
version: 0.1.0 | ||
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# This is the version number of the application being deployed. This version number should be | ||
# incremented each time you make changes to the application. Versions are not expected to | ||
# follow Semantic Versioning. They should reflect the version the application is using. | ||
# It is recommended to use it with quotes. | ||
appVersion: "1.16.0" | ||
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dependencies: | ||
- name: jupyterhub | ||
version: "3.3.7" | ||
repository: https://hub.jupyter.org/helm-chart/ | ||
condition: jupyterhub.enabled | ||
# Optional binderhub build backend | ||
- name: binderhub-service | ||
version : "0.1.0-0.dev.git.201.h161a088" | ||
repository: https://2i2c.org/binderhub-service |
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""" | ||
This file is only used for local development | ||
and overrides some of the default values from the plugin. | ||
""" | ||
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from kubespawner import KubeSpawner | ||
from pathlib import Path | ||
from tljh_repo2docker import TLJH_R2D_ADMIN_SCOPE | ||
from tornado import web | ||
from traitlets import Bool, Unicode | ||
from traitlets.config import Configurable | ||
import sys | ||
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""" | ||
Helpers for creating BinderSpawners | ||
This file is defined in binderhub/binderspawner_mixin.py and is copied to here | ||
""" | ||
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class BinderSpawnerMixin(Configurable): | ||
""" | ||
Mixin to convert a JupyterHub container spawner to a BinderHub spawner | ||
Container spawner must support the following properties that will be set | ||
via spawn options: | ||
- image: Container image to launch | ||
- token: JupyterHub API token | ||
""" | ||
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def __init__(self, *args, **kwargs): | ||
# Is this right? Is it possible to having multiple inheritance with both | ||
# classes using traitlets? | ||
# https://stackoverflow.com/questions/9575409/calling-parent-class-init-with-multiple-inheritance-whats-the-right-way | ||
# https://github.com/ipython/traitlets/pull/175 | ||
super().__init__(*args, **kwargs) | ||
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auth_enabled = Bool( | ||
False, | ||
help=""" | ||
Enable authenticated binderhub setup. | ||
Requires `jupyterhub-singleuser` to be available inside the repositories | ||
being built. | ||
""", | ||
config=True, | ||
) | ||
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cors_allow_origin = Unicode( | ||
"", | ||
help=""" | ||
Origins that can access the spawned notebooks. | ||
Sets the Access-Control-Allow-Origin header in the spawned | ||
notebooks. Set to '*' to allow any origin to access spawned | ||
notebook servers. | ||
See also BinderHub.cors_allow_origin in binderhub config | ||
for controlling CORS policy for the BinderHub API endpoint. | ||
""", | ||
config=True, | ||
) | ||
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def get_args(self): | ||
if self.auth_enabled: | ||
args = super().get_args() | ||
else: | ||
args = [ | ||
"--ip=0.0.0.0", | ||
f"--port={self.port}", | ||
f"--NotebookApp.base_url={self.server.base_url}", | ||
f"--NotebookApp.token={self.user_options['token']}", | ||
"--NotebookApp.trust_xheaders=True", | ||
] | ||
if self.default_url: | ||
args.append(f"--NotebookApp.default_url={self.default_url}") | ||
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if self.cors_allow_origin: | ||
args.append("--NotebookApp.allow_origin=" + self.cors_allow_origin) | ||
# allow_origin=* doesn't properly allow cross-origin requests to single files | ||
# see https://github.com/jupyter/notebook/pull/5898 | ||
if self.cors_allow_origin == "*": | ||
args.append("--NotebookApp.allow_origin_pat=.*") | ||
args += self.args | ||
# ServerApp compatibility: duplicate NotebookApp args | ||
for arg in list(args): | ||
if arg.startswith("--NotebookApp."): | ||
args.append(arg.replace("--NotebookApp.", "--ServerApp.")) | ||
return args | ||
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def start(self): | ||
if not self.auth_enabled: | ||
if "token" not in self.user_options: | ||
raise web.HTTPError(400, "token required") | ||
if "image" not in self.user_options: | ||
raise web.HTTPError(400, "image required") | ||
if "image" in self.user_options: | ||
self.image = self.user_options["image"] | ||
return super().start() | ||
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def get_env(self): | ||
env = super().get_env() | ||
if "repo_url" in self.user_options: | ||
env["BINDER_REPO_URL"] = self.user_options["repo_url"] | ||
for key in ( | ||
"binder_ref_url", | ||
"binder_launch_host", | ||
"binder_persistent_request", | ||
"binder_request", | ||
): | ||
if key in self.user_options: | ||
env[key.upper()] = self.user_options[key] | ||
return env | ||
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class BinderSpawner(BinderSpawnerMixin, KubeSpawner): | ||
pass | ||
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HERE = Path(__file__).parent | ||
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c.JupyterHub.spawner_class = BinderSpawner | ||
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c.JupyterHub.allow_named_servers = True | ||
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c.JupyterHub.services.extend( | ||
[ | ||
{"name": "binder", "url": "http://tljh-binderhub-service"}, | ||
{ | ||
"name": "tljhrepo2docker", | ||
"url": "http://r2d-svc:6789", | ||
"command": [ | ||
sys.executable, | ||
"-m", | ||
"tljh_repo2docker", | ||
"--ip", | ||
"0.0.0.0", | ||
"--port", | ||
"6789", | ||
"--TljhRepo2Docker.binderhub_url", | ||
"http://tljh-binderhub-service/services/binder", | ||
], | ||
"oauth_no_confirm": True, | ||
"oauth_client_allowed_scopes": [ | ||
TLJH_R2D_ADMIN_SCOPE, | ||
], | ||
}, | ||
] | ||
) | ||
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c.JupyterHub.custom_scopes = { | ||
TLJH_R2D_ADMIN_SCOPE: { | ||
"description": "Admin access to myservice", | ||
}, | ||
} | ||
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c.JupyterHub.load_roles = [ | ||
{ | ||
"description": "Role for tljh_repo2docker service", | ||
"name": "tljh-repo2docker-service", | ||
"scopes": [ | ||
"read:users", | ||
"read:roles:users", | ||
"admin:servers", | ||
"access:services!service=binder", | ||
], | ||
"services": ["tljhrepo2docker"], | ||
}, | ||
{ | ||
"name": "tljh-repo2docker-service-admin", | ||
"users": [], # List of users having admin right on tljh-repo2docker | ||
"scopes": [TLJH_R2D_ADMIN_SCOPE], | ||
}, | ||
{ | ||
"name": "user", | ||
"scopes": [ | ||
"self", | ||
# access to the env page | ||
"access:services!service=tljhrepo2docker", | ||
], | ||
}, | ||
] |
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