v0.6.6 - corrected a bug when using multiple input files

Cargo.toml

@@ -1,6 +1,6 @@
 [package]
 name = "back_to_sequences"
-version = "0.6.5"
+version = "0.6.6"
 edition = "2021"
 
 authors = [

README.md

@@ -195,7 +195,7 @@ Say you have three input read files `1.fa`, `2.fa`, `3.fa` to which you wish to
 1. create an input and an output files:
 ```bash
 ls 1.fa 2.fa 3.fa > in.fof
-echo 1_out.fa 2_out.fa 3_out.fa > out.fof
+echo "1_out.fa\n2_out.fa\n3_out.fa" > out.fof
 ```
 2. run `back_to_sequences`
 ```bash

VERSIONS.md

@@ -50,4 +50,6 @@
     * Fixed a filtering bug: As percentage of shared kmers were rounded to 2 decimals, and as we exclude the min-threshold value, 
     some reads with shared kmers were discarded while 
     they contained shared kmers. Now the tset is made before to round values + output values are rounded to 5 decimals.
+* 0.6.6 26/06/2024
+    * Corrected a bug related to the usage of --in-filelist when querying multiple input files
 

src/cli.rs

@@ -113,7 +113,7 @@ pub fn validate_non_empty_file(in_file: String) -> anyhow::Result<()> {
             anyhow::bail!("{:#} exists, but it's not a file.", in_file)
         }
     } else {
-        anyhow::bail!("{:#} exists, but it's not a file.", in_file)
+        anyhow::bail!("{:#} is not a file.", in_file)
     }
 
     Ok(())

src/main.rs

@@ -25,7 +25,7 @@ fn main() -> anyhow::Result<()> {
     env::set_var("RAYON_NUM_THREADS", args.threads.to_string());
 
     // If out_sequences and out_kmers are not provided, we do nothing, we can quit
-    if args.out_sequences.is_empty() && args.out_kmers.is_empty() {
+    if args.out_sequences.is_empty() && args.out_filelist.is_empty() && args.out_kmers.is_empty() {
         anyhow::bail!("no output file provided, nothing to do");
     }