update run_DCE.yml, maybe fix .fig->.png, rename test files

.github/workflows/run_DCE.yml

@@ -37,7 +37,7 @@ jobs:
       - name: Run T1 mapping
         uses: matlab-actions/run-command@v2
         with:
-          command: addpath .; addpath dce/; addpath external_programs/; addpath external_programs/niftitools/; addpath parametric_scripts/; addpath parametric_scripts/custom_scripts/; T1mapping_fit('test_data/BIDS_test/rawdata/sub-01/ses-01/anat/', 'test_data/BIDS_test/derivatives/sub-01/ses-01/anat/', 'sub-01_ses-01_space-DCEref_desc-bfczunified_VFA.nii.gz')
+          command: addpath .; addpath dce/; addpath external_programs/; addpath external_programs/niftitools/; addpath parametric_scripts/; addpath parametric_scripts/custom_scripts/; T1mapping_fit('test_data/BIDS_test/rawdata/sub-01/ses-01/anat/', 'test_data/BIDS_test/derivatives/sub-01/ses-01/anat/', 'sub-01_ses-01_space-DCEref_desc-bfczunified_VFA.nii')
 
       - name: Run DCE
         uses: matlab-actions/run-command@v2
@@ -48,7 +48,7 @@ jobs:
         uses: actions/upload-artifact@v4
         with:
           name: Ktrans_result
-          path: test_data/BIDS_test/derivatives/sub-01/ses-01/dce_patlak_fit_Ktrans.nii
+          path: test_data/BIDS_test/derivatives/sub-01/ses-01/dce/dce_patlak_fit_Ktrans.nii
           retention-days: 7
           if-no-files-found: error
 

run_dce_cli.m

@@ -219,11 +219,11 @@ function run_dce_cli(subject_source_path, subject_tp_path)
     end
     % fig to png
     cd(subject_tp_path);
-    fig = openfig(strcat(subject_tp_path,'dce/dceAIF_fitting.fig'));
+    fig = openfig('dce/dceAIF_fitting.fig');
     filename = 'dce/dceAIF_fitting.png';
     saveas(fig, filename);
 
-    fig = openfig(strcat(subject_tp_path,'dce/dce_timecurves.fig'));
+    fig = openfig('dce/dce_timecurves.fig');
     filename = 'dce/dce_timecurves.png';
     saveas(fig, filename);