Skip to content
This repository has been archived by the owner on Oct 1, 2024. It is now read-only.

H5py-like interface #65

Merged
merged 29 commits into from
Aug 7, 2019
Merged

H5py-like interface #65

Show file tree
Hide file tree
Changes from all commits
Commits
Show all changes
29 commits
Select commit Hold shift + click to select a range
3478562
Add h5py_like to requirements
clbarnes Jun 28, 2019
cbff525
Add tests for h5py-like interface
clbarnes Jun 28, 2019
5900886
Add implementation for h5py-like interface
clbarnes Jun 28, 2019
8cabda9
chunk-guessing (requires h5py_like 0.3)
clbarnes Jul 15, 2019
61e0ac2
restrict version to 3.7
clbarnes Jul 15, 2019
d0d7da5
align editorconfig with flake8
clbarnes Jul 15, 2019
2c48699
fix lint issues
clbarnes Jul 15, 2019
d407689
safer N5 dataset metadata handling
clbarnes Jul 15, 2019
8f656ef
dataset maxshape = shape
clbarnes Jul 15, 2019
a1a7a1d
make block ordering explicit with tests
clbarnes Jul 15, 2019
7a26024
add h5py to requirements, for testing
clbarnes Jul 15, 2019
65724e1
add tests to compare with z5
clbarnes Jul 15, 2019
f746c0d
use same compression in z5/pyn5
clbarnes Jul 16, 2019
114b675
test for block hashsum identity
clbarnes Jul 16, 2019
7620ec0
n5 version handling
clbarnes Jul 16, 2019
dcd0492
Cross-check with z5
clbarnes Jul 16, 2019
31e2583
revert some travis changes
clbarnes Jul 16, 2019
951049a
Add configurable compression
clbarnes Jul 16, 2019
fe0ba2b
Merge branch 'compression' into h5pylike
clbarnes Jul 16, 2019
d0670df
h5like compression handling
clbarnes Jul 17, 2019
a67d9f5
test for block hash identity with z5
clbarnes Jul 17, 2019
b687427
fix lint issues
clbarnes Jul 17, 2019
f29b012
python 3.6 compatibility
clbarnes Jul 17, 2019
135ead9
enum for supported compression types
clbarnes Jul 17, 2019
686b7a5
test for non-default compression, default option
clbarnes Jul 17, 2019
edd328e
better error when no n5 version found
clbarnes Jul 17, 2019
5c4d5db
documentation
clbarnes Jul 17, 2019
4ce43b7
add 3.6
clbarnes Jul 17, 2019
fdc3989
add threading and tests
clbarnes Jul 18, 2019
File filter

Filter by extension

Filter by extension
Conversations
Failed to load comments.
Loading
Jump to
Jump to file
Failed to load files.
Loading
Diff view
Diff view
1 change: 1 addition & 0 deletions .editorconfig
View file
Open in desktop
Original file line number Diff line number Diff line change
Expand Up @@ -9,6 +9,7 @@ trim_trailing_whitespace = true
insert_final_newline = true
charset = utf-8
end_of_line = lf
max_line_length = 98

[*.bat]
indent_style = tab
Expand Down
8 changes: 1 addition & 7 deletions .travis.yml
View file
Open in desktop
Original file line number Diff line number Diff line change
Expand Up @@ -36,17 +36,12 @@ deploy_template: &deploy_template

jobs:
include:
- <<: *test_template
python: 3.5
- <<: *test_template
python: 3.6
- <<: *test_template
python: 3.7
dist: xenial
python: 3.7
sudo: required
- <<: *deploy_template
env:
- CIBW_BUILD=cp35-*
- <<: *deploy_template
env:
- CIBW_BUILD=cp36-*
Expand All @@ -62,4 +57,3 @@ jobs:
secure: 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
provider: pypi
user: pattonw

Loading