Update update-page.yml #8
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
| name: Generate Pathoplexus Example Data List | |
| on: | |
| push: | |
| jobs: | |
| build: | |
| runs-on: ubuntu-latest | |
| steps: | |
| - uses: actions/checkout@v2 | |
| - name: Set up Python | |
| uses: actions/setup-python@v2 | |
| with: | |
| python-version: '3.x' | |
| - name: Create Python script | |
| run: | | |
| cat << EOF > generate_list.py | |
| import os | |
| import html | |
| from datetime import datetime | |
| def get_file_icon(file): | |
| ext = os.path.splitext(file)[1].lower() | |
| if ext in ['.fasta', '.fa', '.fna']: | |
| return '<i class="fas fa-dna" title="FASTA file"></i>' | |
| elif ext in ['.tsv', '.tab']: | |
| return '<i class="fas fa-table" title="TSV file"></i>' | |
| elif ext in ['.py', '.js', '.css', '.html', '.json']: | |
| return f'<i class="fas fa-file-code" title="{ext[1:]} file"></i>' | |
| elif ext in ['.jpg', '.jpeg', '.png', '.gif', '.svg']: | |
| return f'<i class="fas fa-file-image" title="{ext[1:]} file"></i>' | |
| elif ext in ['.pdf', '.doc', '.docx', '.txt']: | |
| return f'<i class="fas fa-file-alt" title="{ext[1:]} file"></i>' | |
| else: | |
| return '<i class="fas fa-file"></i>' | |
| def generate_html(): | |
| file_list = [] | |
| for root, dirs, files in os.walk('example_files'): | |
| for file in files: | |
| if file != 'index.html' and not file.startswith('.'): | |
| path = os.path.join(root, file) | |
| size = os.path.getsize(path) | |
| mtime = os.path.getmtime(path) | |
| file_list.append((path, size, mtime)) | |
| html_content = ''' | |
| <!DOCTYPE html> | |
| <html lang="en"> | |
| <head> | |
| <meta charset="UTF-8"> | |
| <meta name="viewport" content="width=device-width, initial-scale=1.0"> | |
| <title>Pathoplexus Example Files</title> | |
| <link href="https://cdnjs.cloudflare.com/ajax/libs/font-awesome/5.15.1/css/all.min.css" rel="stylesheet"> | |
| <style> | |
| body { font-family: 'Segoe UI', Tahoma, Geneva, Verdana, sans-serif; line-height: 1.6; padding: 20px; background-color: #f4f4f4; color: #333; } | |
| .container { max-width: 800px; margin: 0 auto; background-color: #fff; padding: 20px; border-radius: 5px; box-shadow: 0 2px 5px rgba(0,0,0,0.1); } | |
| h1 { color: #2c3e50; text-align: center; margin-bottom: 20px; } | |
| table { width: 100%; border-collapse: collapse; } | |
| th, td { padding: 12px; text-align: left; border-bottom: 1px solid #e0e0e0; } | |
| th { background-color: #f2f2f2; font-weight: bold; color: #2c3e50; } | |
| tr:hover { background-color: #f5f5f5; } | |
| a { color: #3498db; text-decoration: none; } | |
| a:hover { color: #2980b9; } | |
| .file-icon { margin-right: 10px; color: #7f8c8d; } | |
| .file-size, .file-date { color: #7f8c8d; font-size: 0.9em; } | |
| </style> | |
| </head> | |
| <body> | |
| <div class="container"> | |
| <h1>Pathoplexus Example Files</h1> | |
| <table> | |
| <thead> | |
| <tr> | |
| <th>File Name</th> | |
| <th>Size</th> | |
| <th>Last Modified</th> | |
| </tr> | |
| </thead> | |
| <tbody> | |
| ''' | |
| for file, size, mtime in sorted(file_list): | |
| file = file.replace("example_files/", "") | |
| icon = get_file_icon(file) | |
| size_str = f'{size/1024:.1f} KB' if size >= 1024 else f'{size} bytes' | |
| date_str = datetime.fromtimestamp(mtime).strftime('%Y-%m-%d %H:%M:%S') | |
| html_content += f''' | |
| <tr> | |
| <td><a href="example_files/{html.escape(file)}">{icon} {html.escape(file)}</a></td> | |
| <td class="file-size">{size_str}</td> | |
| <td class="file-date">{date_str}</td> | |
| </tr> | |
| ''' | |
| html_content += ''' | |
| </tbody> | |
| </table> | |
| </div> | |
| </body> | |
| </html> | |
| ''' | |
| with open('index.html', 'w') as f: | |
| f.write(html_content) | |
| generate_html() | |
| EOF | |
| - name: Generate Pathoplexus example data list | |
| run: python generate_list.py | |
| - name: Commit and push to gh-pages | |
| run: | | |
| git config --global user.name 'GitHub Action' | |
| git config --global user.email '[email protected]' | |
| git checkout -b gh-pages | |
| git add index.html | |
| git commit -m "Update Pathoplexus example data list" || exit 0 | |
| git push -f origin gh-pages |