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OATML-Markslab/Tranception
OATML-Markslab/Tranception PublicOfficial repository for the paper "Tranception: Protein Fitness Prediction with Autoregressive Transformers and Inference-time Retrieval"
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OATML-Markslab/ProteinGym
OATML-Markslab/ProteinGym PublicOfficial repository for the ProteinGym benchmarks
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OATML-Markslab/ProteinNPT
OATML-Markslab/ProteinNPT PublicOfficial code repository for the paper "ProteinNPT: Improving Protein Property Prediction and Design with Non-Parametric Transformers"
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OATML-Markslab/EVEscape
OATML-Markslab/EVEscape PublicOfficial repository for the paper "Learning from pre-pandemic data to forecast viral antibody escape"
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uncertainty_guided_optimization
uncertainty_guided_optimization PublicOfficial repository for the paper "Improving black-box optimization in VAE latent space using decoder uncertainty" (Pascal Notin, José Miguel Hernández-Lobato, Yarin Gal)
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