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fix bcftools executables
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subwaystation committed Mar 13, 2024
1 parent 955a0ed commit 927c188
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2 changes: 1 addition & 1 deletion Dockerfile
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Expand Up @@ -180,7 +180,7 @@ RUN wget https://github.com/arq5x/bedtools2/releases/download/v2.31.0/bedtools.s
# current bcftools
RUN wget https://github.com/samtools/bcftools/releases/download/1.19/bcftools-1.19.tar.bz2 \
&& tar xjf bcftools-1.19.tar.bz2 \
&& cd bcftools-1.19/ && ./configure --prefix=/usr/local/bin/ && make && make install && export PATH=/usr/local/bin/bin:$PATH && cd ..
&& cd bcftools-1.19/ && ./configure --prefix=/usr/local/bin/ && make && make install && export PATH=/usr/local/bin/bin:$PATH && cd .. && cp /usr/local/bin/bin/* /usr/local/bin/

RUN bcftools

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