Merge branch 'documentation-devel' into documentation

pachterlab · Nov 28, 2023 · fdb6759 · fdb6759
2 parents 7d796f0 + 831d49d
commit fdb6759
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diff --git a/.github/workflows/pkgdown-devel.yaml b/.github/workflows/pkgdown-devel.yaml
@@ -23,11 +23,14 @@ jobs:
  - name: Setup R and Bioconductor
  uses: grimbough/bioc-actions/setup-bioc@v1
  with:
- bioc-version: devel
+ bioc-version: release
  - uses: r-lib/actions/setup-r-dependencies@v2
  with:
  extra-packages: any::pkgdown, local::.
  needs: website
+ - name: Install irlba from source
+ run: install.packages("irlba", type = "source")
+ shell: Rscript {0}
  - name: Setup python
  uses: actions/setup-python@v2
  with:

diff --git a/.github/workflows/pkgdown.yaml b/.github/workflows/pkgdown.yaml
@@ -30,9 +30,9 @@ jobs:
  with:
  extra-packages: any::pkgdown, local::.
  needs: website
- #- name: Install github version of SFEData
- # run: remotes::install_github("pachterlab/SFEData")
- # shell: Rscript {0}
+ - name: Install irlba from source
+ run: install.packages("irlba", type = "source")
+ shell: Rscript {0}
  - name: Setup python
  uses: actions/setup-python@v2
  with: