New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

Sign up for GitHub

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Jump to bottom

Benchmarking #71

Open

Adamtaranto opened this issue Sep 30, 2024 · 0 comments

Collaborator

Adamtaranto commented Sep 30, 2024

@ctb what are your plans re automated benchmarking?

I guess we should compare with Jellyfish and KMC, maybe Meryl?

Some notionally have python bindings, but are notoriously difficult to get working.

Maybe compare speed and peak memory use for processing T2T human assembly?

Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment