Skip to content

Commit

Permalink
Update lab_10.md
Browse files Browse the repository at this point in the history
  • Loading branch information
owensgl authored Mar 20, 2024
1 parent a44e0c2 commit d30a397
Showing 1 changed file with 1 addition and 1 deletion.
2 changes: 1 addition & 1 deletion labs/lab_10.md
Original file line number Diff line number Diff line change
Expand Up @@ -142,7 +142,7 @@ quast -o mutant_quast -r wildtype.fna mutant/contigs.fa

The output of QUAST is text files, but it also has HTML reports. Download the entire
mutant_quast directory to your desktop using scp, and then open icarus.html.
In the QUAST report section, it includes some importnat graphs.
In the QUAST report section, it includes some important graphs.

![cumulative plot](../figs/lab_10.1.png)
This graph shows the cumulative length of contigs starting with the longest and moving shorter, in the red line. The grey line is the total length of the reference genome. In an
Expand Down

0 comments on commit d30a397

Please sign in to comment.