Create lab_6.md

labs/lab_6.md

@@ -0,0 +1,23 @@
+---
+title: Unknown
+element: lab
+layout: default
+---
+
+## Objectives
+
+- To learn how to align sequence data to a reference.
+- To learn how to interpret sam and bam files.
+- To learn how to manipulate a bam file.
+- To learn how to filter a bam file.
+
+****
+
+#Download some data
+#Download a reference genome
+#Index your reference genome
+#Align data
+#Look around bam file
+#Sort bam file.
+#Extract single region of bam file
+#Remove PCR duplicates.