Repositories list

• AndromedaBackendTest

  Public
  Benchmarks for Andromeda using SQLite vs DuckDB

  0•0•0•0•Updated Jan 8, 2025Jan 8, 2025

• ExampleStrategusStudy

  Public
  An example study using Strategus >= 1.0

  R

  •1•0•0•0•Updated Dec 20, 2024Dec 20, 2024

• Andromeda

  Public
  AsynchroNous Disk-based Representation of MassivE DAta: An R package aimed at replacing ff for storing large data objects.

  R

  •13•0•0•0•Updated Dec 16, 2024Dec 16, 2024

• Glp1Dili

  Public
  R

  •

  Apache License 2.0

  •3•0•0•0•Updated Nov 25, 2024Nov 25, 2024

• FeatureExtraction

  Public
  An R package for generating features (covariates) for a cohort using data in the Common Data Model.

  R

  •61•0•0•0•Updated Nov 15, 2024Nov 15, 2024

• CohortMethod

  Public
  An R package for performing new-user cohort studies in an observational database in the OMOP Common Data Model.

  R

  •59•0•0•0•Updated Oct 24, 2024Oct 24, 2024

• cohort-middleware

  Public
  Middleware to work with Atlas cohorts in Gen3

  Go

  •

  Apache License 2.0

  •1•0•0•0•Updated Oct 15, 2024Oct 15, 2024

• OncologyReadiness

  Public
  R

  •0•0•1•0•Updated Oct 1, 2024Oct 1, 2024

• LegendT2dm

  Public
  C++

  •16•2•0•0•Updated Sep 23, 2024Sep 23, 2024

• Atlas-2.15-dev

  Public
  ATLAS is an open source software tool for researchers to conduct scientific analyses on standardized observational data

  JavaScript

  •

  Apache License 2.0

  •139•0•0•0•Updated Sep 9, 2024Sep 9, 2024

• WebAPI-2-15-dev

  Public
  OHDSI WebAPI contains all OHDSI services that can be called from OHDSI applications

  Java

  •

  Apache License 2.0

  •168•0•0•0•Updated Sep 2, 2024Sep 2, 2024

• DbDiagnostics

  Public
  Package to profile a database and execute data diagnostics based on individual analysis settings

  R

  •

  Apache License 2.0

  •6•0•0•0•Updated Aug 9, 2024Aug 9, 2024

• SemaglutideNaion

  Public
  OHDSI network study for population-level effect estimation of risk of NAION and other vision disorders from exposure to semaglutide.

  R

  •4•0•0•0•Updated Jul 31, 2024Jul 31, 2024

• Strategus

  Public
  [Under development] An R packages for coordinating and executing analytics using HADES modules

  R

  •11•0•0•0•Updated Jul 31, 2024Jul 31, 2024

• CohortGeneratorModule

  Public
  [Under development] A module wrapper around the CohortGenerator package

  R

  •8•0•0•0•Updated Jul 29, 2024Jul 29, 2024

• Archived-WebAPI-2.14-dev

  Public
  OHDSI WebAPI contains all OHDSI services that can be called from OHDSI applications

  Java

  •

  Apache License 2.0

  •168•1•0•0•Updated Mar 13, 2024Mar 13, 2024

• Archived-Atlas-2.14-dev

  Public
  ATLAS is an open source software tool for researchers to conduct scientific analyses on standardized observational data

  JavaScript

  •

  Apache License 2.0

  •139•1•0•0•Updated Feb 12, 2024Feb 12, 2024

• HowOften

  Public
  [under development] Large-scale incidence characterization

  R

  •9•0•0•0•Updated Oct 23, 2023Oct 23, 2023

• OLGLMM-COVID

  Public
  R

  •1•0•0•0•Updated Jun 26, 2023Jun 26, 2023

• VaTools

  Public
  HTML

  •2•1•0•0•Updated Jun 6, 2023Jun 6, 2023

• FluoroquinoloneAorticAneurysm

  Public
  [under development]

  9•0•0•0•Updated May 11, 2023May 11, 2023

• VaDbDiagnostics

  Public
  R

  •0•0•0•0•Updated Apr 7, 2023Apr 7, 2023

• PatientLevelPrediction

  Public
  An R package for performing patient level prediction in an observational database in the OMOP Common Data Model.

  C++

  •90•0•0•0•Updated Mar 4, 2023Mar 4, 2023

• ReproducibilityRayJAMA2021

  Public
  [Under development] Reproducibility study of Ray et al JAMA 2021 comparative effectiveness of rivaroxaban vs apixaban in atrial fibrillation

  C++

  •3•0•0•0•Updated Dec 16, 2022Dec 16, 2022

• dGEMcovid

  Public
  R

  •1•0•0•0•Updated May 26, 2022May 26, 2022

• OHDSI_prone

  Public
  Repository for files and code related to the OHDSI Prone Incident study

  Java

  •2•0•0•0•Updated Apr 13, 2022Apr 13, 2022

• ShinyOhdsiSharing

  Public
  R

  •0•0•0•0•Updated Feb 11, 2022Feb 11, 2022

• PhenotypePhebruary

  Public
  R

  •

  Other

  •1•0•0•0•Updated Feb 1, 2022Feb 1, 2022

• MusculoskeletalAEsAfterAIs

  Public
  A Population level estimate (PLE) cohort study with prior A Cohort Diagnostics study to determine the feasibility using non-identifiable data mapped to the OHDSI Observational Medical Outcomes Partnership (OMOP) Common Data Model (CDM) to evaluate the risk of adverse musculoskeletal events in post-menopausal women taking AI compared to tamoxifen…

  R

  •3•0•0•0•Updated Dec 22, 2021Dec 22, 2021

• PioneerWatchfulWaiting

  Public
  This study is part of the joint PIONEER - EHDEN - OHDSI studyathon in March 2021, and aims to advance understanding of clinical management and outcomes of watchful waiting in prostate cancer.

  R

  •

  Apache License 2.0

  •18•0•0•0•Updated Dec 3, 2021Dec 3, 2021