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    20 repositories

    • openMINDS_neuroimaging

      Public
      A metadata model for MRI experiments; an openMINDS extension
      submoduleopenminds
      MIT License
      •2•0•1•1•Updated Dec 12, 2024Dec 12, 2024

    • openMINDS_core

      Public
      The openMINDS core metadata model includes schemas that can be used to describe the general origin, location and content of research products.
      submoduleopenminds
      MIT License
      •19•20•28•2•Updated Dec 3, 2024Dec 3, 2024

    • openMINDS

      Public
      Complete collection of schemas for the metadata models of the openMINDS metadata framework. All schemas are formatted in the openMINDS syntax (*.schema.omi.json).
      openminds
      MIT License
      •3•0•14•1•Updated Dec 3, 2024Dec 3, 2024

    • openMINDS_instances

      Public
      Well defined metadata instances for selected schemas of the openMINDS metadata models.
      openminds
      Python
      •
      MIT License
      •11•0•75•11•Updated Dec 2, 2024Dec 2, 2024

    • openMINDS_MATLAB

      Public
      MATLAB package for the openMINDS metadata models. The package contains all openMINDS schemas as MATLAB classes in addition to schema base classes and utility methods
      metadataneurosciencetargetopenminds
      MATLAB
      •
      MIT License
      •3•3•10•1•Updated Nov 27, 2024Nov 27, 2024

    • openMINDS_documentation

      Public
      Read-The-Docs documentation for the openMINDS metadata framework.
      targetopenminds
      MIT License
      •3•0•19•4•Updated Nov 13, 2024Nov 13, 2024

    • openMINDS_JSON-Schema

      Public
      Complete collection of schemas for the metadata models of the openMINDS metadata framework. All schemas are formatted in JSON-Schema (*.schema.json).
      targetopenminds
      MIT License
      •1•0•1•0•Updated Nov 13, 2024Nov 13, 2024

    • openMINDS_controlledTerms

      Public
      Metadata model for the consistent registration of well-defined terms as well as a corresponding library of terminologies (including links to ontological terms where applicable).
      submoduleopenminds
      MIT License
      •12•7•4•0•Updated Nov 12, 2024Nov 12, 2024

    • openMINDS_SANDS

      Public
      A metadata model capturing Spatial Anchoring of Neuroscience Data Structures, including brain atlas definitions.
      submoduleopenminds
      Python
      •
      MIT License
      •11•12•9•1•Updated Nov 12, 2024Nov 12, 2024

    • bids2openminds

      Public
      A tool to generate openMINDS metadata from BIDS datasets
      Python
      •
      MIT License
      •3•1•14•2•Updated Oct 7, 2024Oct 7, 2024

    • openMINDS_computation

      Public
      A metadata model for simulation, data analysis and visualization provenance in neuroscience
      submoduleopenminds
      MIT License
      •4•0•0•0•Updated Oct 7, 2024Oct 7, 2024

    • openMINDS_chemicals

      Public
      A metadata model for capturing in-depth descriptions of chemical substances and mixtures.
      submoduleopenminds
      MIT License
      •2•2•3•0•Updated Oct 1, 2024Oct 1, 2024

    • openMINDS_ephys

      Public
      A metadata model for capturing in-depth descriptions of electrophysiology experiments.
      submoduleopenminds
      MIT License
      •5•4•0•0•Updated Sep 24, 2024Sep 24, 2024

    • openMINDS_specimenPrep

      Public
      A metadata model capturing in-depth descriptions of specimen preparations.
      submoduleopenminds
      MIT License
      •2•1•0•1•Updated Sep 24, 2024Sep 24, 2024

    • openMINDS_stimulation

      Public
      A metadata model capturing in-depth descriptions of stimuli and stimulation protocols in neuroscience.
      submoduleopenminds
      MIT License
      •3•1•1•0•Updated Sep 24, 2024Sep 24, 2024

    • openMINDS_publications

      Public
      A metadata model for scholarly publications in neuroscience, including live papers
      submoduleopenminds
      MIT License
      •2•0•0•0•Updated Sep 24, 2024Sep 24, 2024

    • .github

      Public
      README repository for openMetadataInitiative organization.
      0•0•0•0•Updated Sep 23, 2024Sep 23, 2024

    • openMINDS_Python

      Public
      Python package for the openMINDS metadata models. The package contains all openMINDS schemas as Python classes in addition to schema base classes and utility methods.
      targetopenminds
      Python
      •
      MIT License
      •2•1•12•3•Updated Aug 28, 2024Aug 28, 2024

    • openMINDS_LinkML

      Public
      Complete collection of schemas for the metadata models of the openMINDS metadata framework. All schemas are formatted in LinkML (*.yaml).
      targetopenminds
      MIT License
      •0•1•0•0•Updated Feb 8, 2024Feb 8, 2024

    • openMINDS_Java

      Public
      A Java library for openMINDS
      Java
      •0•0•0•0•Updated Nov 30, 2023Nov 30, 2023