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    17 repositories

    • recount3

      Public
      Explore and download data from the recount3 project
      R
      •4•0•0•0•Updated Mar 11, 2024Mar 11, 2024

    • MolScaling

      Public
      Source code for the paper 'Uncovering Neural Scaling Laws in Molecular Representation Learning' (NeurIPS 2023 Datasets and Benchmarks).
      Python
      •
      MIT License
      •3•0•0•0•Updated Jan 20, 2024Jan 20, 2024

    • chemprop

      Public
      Message Passing Neural Networks for Molecule Property Prediction
      Python
      •
      Other
      •586•0•0•0•Updated Jan 20, 2024Jan 20, 2024

    • CellProfiler

      Public
      An open-source application for biological image analysis
      Python
      •
      Other
      •376•0•0•0•Updated Nov 15, 2023Nov 15, 2023

    • MapLight-TDC

      Public
      Python
      •
      MIT License
      •4•0•0•0•Updated Nov 6, 2023Nov 6, 2023

    • DS2VCF

      Public
      Annotate VCF file with dosages estimated from genotype likelihoods
      C++
      •
      MIT License
      •2•0•0•0•Updated Oct 24, 2023Oct 24, 2023

    • als_only_clinical_vae

      Public
      This study has only ALS patients. The initial one 'als_clinical_vae' had additional patients such as (Non-ALS MND)
      Python
      •0•0•0•0•Updated Sep 22, 2023Sep 22, 2023

    • Computational-ADME

      Public
      Python
      •
      MIT License
      •13•0•0•0•Updated Apr 24, 2023Apr 24, 2023

    • wbplot

      Public
      Automated plotting of neuroimaging maps from Python using Connectome Workbench.
      Python
      •
      GNU General Public License v3.0
      •6•0•0•0•Updated May 6, 2022May 6, 2022

    • leafcutter

      Public
      Annotation-free quantification of RNA splicing. Yang I. Li, David A. Knowles, Jack Humphrey, Alvaro N. Barbeira, Scott P. Dickinson, Hae Kyung Im, Jonathan K. Pritchard
      R
      •
      Apache License 2.0
      •115•0•0•0•Updated Apr 3, 2022Apr 3, 2022

    • data-registry-browser

      Public
      A browser for open-data-registry: https://github.com/awslabs/open-data-registry
      JavaScript
      •
      Apache License 2.0
      •19•0•0•0•Updated Aug 31, 2021Aug 31, 2021

    • megadepth

      Public
      BigWig and BAM utilities
      C++
      •
      Other
      •9•0•0•0•Updated Dec 17, 2020Dec 17, 2020

    • monorail-external

      Public
      examples to run monorail externally
      Shell
      •
      MIT License
      •5•0•0•0•Updated Nov 9, 2020Nov 9, 2020

    • pyhsmm

      Public
      Python
      •
      MIT License
      •174•0•0•0•Updated Sep 29, 2020Sep 29, 2020

    • pybasicbayes

      Public
      Python
      •
      MIT License
      •60•0•0•0•Updated Sep 28, 2020Sep 28, 2020

    • pyhsmm-autoregressive

      Public
      autoregressive plugin
      Python
      •
      GNU General Public License v2.0
      •27•0•0•0•Updated Sep 28, 2020Sep 28, 2020

    • quilt

      Public
      Quilt is a versioned data portal for S3
      Jupyter Notebook
      •
      Apache License 2.0
      •90•0•0•0•Updated Jul 23, 2020Jul 23, 2020