Repositories list

• 2024-Rodrigues-PLOS

  Public
  Analysis code for Rodrigues et al., 2024

  pythonresearchbinder

  Jupyter Notebook

  •

  Creative Commons Attribution 4.0 International

  •0•0•2•0•Updated Oct 5, 2024Oct 5, 2024

• par-segmentation

  Public
  Cell cortex segmentation and quantification in C. elegans PAR protein images

  pythondockermachine-learning+ 4bindertensorflowimage-segmentationimage-analysis

  Python

  •

  Creative Commons Attribution 4.0 International

  •2•1•3•0•Updated Jul 9, 2024Jul 9, 2024

• 2024-Bland-EMBO

  Public
  Complete analysis code for Bland et al., 2024

  pythondockerresearch+ 4modellingimage-analysisbiophysicscell-biology

  Jupyter Notebook

  •

  Creative Commons Attribution 4.0 International

  •0•0•1•0•Updated Jun 4, 2024Jun 4, 2024

• saibr_python

  Public
  Python implementation of SAIBR: a tool for performing spectral autofluorescence correction on biological images

  pythonimage-processing

  Python

  •

  Creative Commons Attribution 4.0 International

  •0•1•0•0•Updated Nov 17, 2023Nov 17, 2023

• 2023-Illukkumbura-JCB-modelling

  Public
  Modelling code for Illukkumbura et al., 2023

  researchpartial-differential-equationspython

  Jupyter Notebook

  •

  Creative Commons Attribution 4.0 International

  •0•0•0•0•Updated Nov 7, 2023Nov 7, 2023

• saibr_fiji_plugin

  Public
  A simple GUI-based FIJI plugin for performing spectral autofluorescence correction on biological images

  javaimage-processinggraphical-user-interface+ 1fiji-plugin

  Java

  •

  Creative Commons Attribution 4.0 International

  •0•3•1•0•Updated Aug 21, 2023Aug 21, 2023

• 2020-Illukkumbura-COCB-modelling

  Public
  Modelling code for Illukkumbura et al., 2020

  pythonresearchpartial-differential-equations

  Python

  •

  Creative Commons Attribution 4.0 International

  •0•0•0•0•Updated Aug 13, 2023Aug 13, 2023