Repositories list

• Oceanwavemodel_NRPS_cEK

  Public
  for the manuscript "Natural diversifying evolution of nonribosomal peptide synthetases in a defensive bacterial symbiont reveals nonmodular functional constraints"

  MATLAB

  •0•0•0•0•Updated Jan 24, 2024Jan 24, 2024

• MetaBGC

  Public
  A metagenomic strategy for harnessing the chemical repertoire of the human microbiome

  Python

  •

  GNU General Public License v3.0

  •8•32•4•0•Updated Aug 30, 2023Aug 30, 2023

• bioconda-recipes

  Public
  Conda recipes for the bioconda channel.

  Shell

  •3.3k•0•0•0•Updated Mar 8, 2021Mar 8, 2021

• personalized_community_MDM_screen

  Public
  Code for design and analysis of MDM-Screen, a method for assaying microbiome-derived metabolism in a personalized manner.

  MATLAB

  •

  GNU General Public License v3.0

  •0•2•0•0•Updated May 16, 2020May 16, 2020

• smNRPS-IBD

  Public
  A role for microbiome-derived small molecules in the etiology of Crohn’s Disease

  Jupyter Notebook

  •

  GNU General Public License v3.0

  •1•1•0•0•Updated Jan 21, 2019Jan 21, 2019