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    • MoVana

      Public
      WDL
      MIT License
      0000Updated Dec 20, 2024Dec 20, 2024
    • LLM_SVs

      Public
      Python
      MIT License
      0000Updated Dec 19, 2024Dec 19, 2024
    • Tandem Repeats Team -- 2024 SVCC Hackathon
      Jupyter Notebook
      MIT License
      0100Updated Dec 19, 2024Dec 19, 2024
    • Python
      MIT License
      5800Updated Dec 19, 2024Dec 19, 2024
    • SVeedy

      Public
      R
      MIT License
      4200Updated Dec 19, 2024Dec 19, 2024
    • R
      MIT License
      3101Updated Dec 19, 2024Dec 19, 2024
    • Jupyter Notebook
      MIT License
      1000Updated Dec 19, 2024Dec 19, 2024
    • Jupyter Notebook
      MIT License
      2100Updated Dec 19, 2024Dec 19, 2024
    • Mimic

      Public
      Generates simulated ONT metegenomic samples based off existing microbiome sample abundances
      Python
      MIT License
      0000Updated Dec 19, 2024Dec 19, 2024
    • Clinical_Report_Design_for_omics_integration
      HTML
      MIT License
      2700Updated Nov 20, 2024Nov 20, 2024
    • MIT License
      0000Updated Sep 26, 2024Sep 26, 2024
    • PIBP

      Public
      MIT License
      0000Updated Jul 24, 2024Jul 24, 2024
    • VarClust

      Public
      A Python package for clustering of single nucleotide variants from high-through seqencing data.
      Python
      Other
      3000Updated May 23, 2024May 23, 2024
    • NIST-GREX

      Public
      Jupyter Notebook
      MIT License
      0100Updated May 5, 2024May 5, 2024
    • isocomp

      Public
      Isocomp provides tools to compare any number of transcriptome assemblies (GTF + fasta) from long read RNAseq
      HTML
      MIT License
      10240Updated May 3, 2024May 3, 2024
    • Everything is bigger in Texas: Pan-Structural Variation hackathon in the Cloud!
      Jupyter Notebook
      MIT License
      0200Updated May 3, 2024May 3, 2024
    • MIT License
      2210Updated May 3, 2024May 3, 2024
    • Python
      MIT License
      2401Updated May 3, 2024May 3, 2024
    • Shell
      MIT License
      0600Updated May 3, 2024May 3, 2024
    • VariantSurvival a Shiny app/ R package to identify genotype-treatment response
      R
      MIT License
      2132Updated Mar 12, 2024Mar 12, 2024
    • TeX
      MIT License
      0000Updated Nov 27, 2023Nov 27, 2023
    • Jupyter Notebook
      MIT License
      1200Updated Nov 9, 2023Nov 9, 2023
    • Jupyter Notebook
      MIT License
      0200Updated Nov 9, 2023Nov 9, 2023
    • vcfs2kgs

      Public
      Jupyter Notebook
      MIT License
      1200Updated Oct 22, 2023Oct 22, 2023
    • Jupyter Notebook
      MIT License
      0230Updated Oct 21, 2023Oct 21, 2023
    • Understanding relationships between complex combinations of OTUs and chronic disease
      Python
      MIT License
      1100Updated Oct 20, 2023Oct 20, 2023
    • CI4CCREFS

      Public
      Data Management for Transformer Models -- References
      MIT License
      0100Updated Sep 7, 2023Sep 7, 2023
    • MIT License
      0200Updated Sep 1, 2023Sep 1, 2023
    • MIT License
      1001Updated Aug 30, 2023Aug 30, 2023
    • MIT License
      0100Updated Aug 29, 2023Aug 29, 2023