Lab for Artificial Intelligence in Medical Imaging

All

31 repositories

DiaMond
Public
Official pytorch implementation of Paper - DiaMond: Dementia Diagnosis with Multi-Modal Vision Transformers Using MRI and PET - WACV 2025
Python
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GNU General Public License v3.0
•1•6•1•0•Updated Nov 5, 2024Nov 5, 2024
mlv2-net
Public
MLV^2-Net: Rater-Based Majority-Label Voting for Consistent Meningeal Lymphatic Vessel Segmentation
GNU General Public License v3.0
•0•0•0•0•Updated Nov 4, 2024Nov 4, 2024
SCSR-core
Public
Python
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GNU General Public License v3.0
•0•0•0•0•Updated Oct 25, 2024Oct 25, 2024
PASTA
Public
Official pytorch implementation of Paper - 🍝 PASTA: Pathology-Aware MRI to PET Cross-modal Translation with Diffusion Models - MICCAI 2024
Python
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GNU General Public License v3.0
•2•12•1•0•Updated Oct 23, 2024Oct 23, 2024
OrganDETR
Public
0•0•0•0•Updated Jul 19, 2024Jul 19, 2024
StablePose
Public
Official Pytorch Implementation of Paper - Stable-Pose: Leveraging Transformers for Pose-Guided Text-to-Image Generation - NeurIPS 2024
Python
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GNU General Public License v3.0
•4•90•0•0•Updated Jul 9, 2024Jul 9, 2024
DAFT
Public
Dynamic Affine Feature Map Transform
Python
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GNU General Public License v3.0
•3•36•0•0•Updated Jun 14, 2024Jun 14, 2024
pcl-protopnet-nw
Public
Our work aims to integrate interpretability of neural networks and self-supervised learning on unlabelled datasets.
Python
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MIT License
•0•0•0•0•Updated Jun 5, 2024Jun 5, 2024
TripletTraining
Public
Official PyTorch Implementation for From Barlow Twins to Triplet Training: Differentiating Dementia with Limited Data - MIDL 2024
Python
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GNU General Public License v3.0
•1•2•0•0•Updated Apr 9, 2024Apr 9, 2024
KeepTheFaith
Public
Python
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GNU General Public License v3.0
•1•2•0•0•Updated Apr 8, 2024Apr 8, 2024
Vox2Cortex
Public
Python
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GNU General Public License v3.0
•12•67•4•0•Updated Mar 5, 2024Mar 5, 2024
PANIC
Public
Prototypical Additive Neural Network for Interpretable Classification
Python
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GNU General Public License v3.0
•3•10•0•0•Updated Dec 4, 2023Dec 4, 2023
HALOS
Public
Python
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GNU General Public License v3.0
•1•3•0•0•Updated Sep 1, 2023Sep 1, 2023
abcd_study
Public
Jupyter Notebook
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MIT License
•1•2•0•0•Updated Jul 31, 2023Jul 31, 2023
AbdomenNet
Public
Python
•0•4•0•12•Updated Dec 8, 2022Dec 8, 2022
causal-effects-in-alzheimers-continuum
Public
Code for the paper "Identification of causal effects of neuroanatomy on cognitive decline requires modeling unobserved confounders"
Jupyter Notebook
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GNU General Public License v3.0
•2•8•0•0•Updated Nov 24, 2022Nov 24, 2022
MetadataNorm
Public
Repository for the paper "Metadata Normalization"
Jupyter Notebook
•4•0•0•0•Updated Oct 20, 2021Oct 20, 2021
STRUDEL
Public
Python
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GNU General Public License v3.0
•0•1•0•0•Updated Sep 27, 2021Sep 27, 2021
SVEHNN
Public
Scalable, Axiomatic Explanations of Deep Alzheimer's Diagnosis from Heterogeneous Data (SVEHNN)
Python
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GNU General Public License v3.0
•0•2•0•0•Updated Sep 23, 2021Sep 23, 2021
Dataset-Bias
Public
Detect and correct bias in neuroimaging
R
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Artistic License 2.0
•107•5•0•0•Updated Apr 13, 2021Apr 13, 2021
nn-common-modules
Public
Pytorch Implementations of Common modules, blocks and losses for CNNs specifically for segmentation models
computer-vision deep-learning pytorch medical-imaging convolutional-layers segmentation densenet convolutional-neural-networks encoder-decoder dice-coefficient
Python
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MIT License
•15•32•5•0•Updated Feb 2, 2021Feb 2, 2021
quickNAT_pytorch
Public
PyTorch Implementation of QuickNAT and Bayesian QuickNAT, a fast brain MRI segmentation framework with segmentation Quality control using structure-wise uncertainty
machine-learning quality-control ai computer-vision deep-learning uncertainty medical-imaging segmentation bayesian convolutional-neural-networks
Python
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MIT License
•37•101•7•0•Updated Jan 7, 2021Jan 7, 2021
point_recalibration
Public
Python
•0•1•0•0•Updated Nov 24, 2020Nov 24, 2020
geomdl_anatomical_mesh
Public
0•1•0•0•Updated Oct 7, 2020Oct 7, 2020
MAS-LR
Public
Pytorch Implementation of MAS-LR, a Continual Learning approach for importance driven incremental domain learning. https://arxiv.org/abs/2005.00079
Python
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MIT License
•2•2•1•0•Updated Oct 3, 2020Oct 3, 2020
almgig
Public
Adversarial Learned Molecular Graph Inference and Generation
chemistry tensorflow graph-convolutional-networks molecule-generation deep-learning generative-adversarial-network
Python
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GNU General Public License v3.0
•1•8•0•0•Updated Jun 25, 2020Jun 25, 2020
squeeze_and_excitation
Public
PyTorch Implementation of 2D and 3D 'squeeze and excitation' blocks for Fully Convolutional Neural Networks
deep-learning segmentation fully-convolutional-networks squeeze-and-excitation pytorch convolutional-networks
Python
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MIT License
•52•315•4•0•Updated Jun 23, 2020Jun 23, 2020
QuickNATv2
Public
Fast Whole Brain Segmentation (Layers, codes and Pre-trained Models)
deep-learning neuroscience neuroanatomy-toolbox brain-segmentation
MATLAB
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MIT License
•17•62•4•0•Updated Apr 9, 2019Apr 9, 2019
DeepNAT
Public
Caffe implementation of DeepNAT for brain segmentation
1•4•1•0•Updated Feb 15, 2019Feb 15, 2019
relaynet_pytorch
Public
Pytorch Implementation of retinal OCT Layer Segmentation (with trained models)
deep-learning segmentation retinal-images oct
Jupyter Notebook
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MIT License
•30•87•8•0•Updated Jul 10, 2018Jul 10, 2018