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@VirtualBrainLab Virtual Brain Lab

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    29 repositories

    • Pinpoint

      Public
      Multi-probe trajectory planning in an intuitive 3D environment
      open-sourcescienceunity3dneuroscienceelectrophysiology
      C#
      •
      GNU General Public License v3.0
      •4•50•103•1•Updated Dec 16, 2024Dec 16, 2024

    • Urchin

      Public
      Universal Renderer for Neuroscience
      C#
      •
      GNU General Public License v3.0
      •2•10•20•2•Updated Dec 13, 2024Dec 13, 2024

    • ephys-link

      Public
      A Python Socket.IO server that allows any Socket.IO-compliant application to communicate with manipulators used in electrophysiology experiments.
      pythonsocket-ioneuroscienceelectrophysiologyephysneurotechvirtualbrainlabsensapexnew-scale
      Python
      •
      GNU General Public License v3.0
      •0•2•10•0•Updated Dec 12, 2024Dec 12, 2024

    • vbl-aquarium

      Public
      Python
      •
      MIT License
      •0•0•5•0•Updated Dec 11, 2024Dec 11, 2024

    • BrainAtlas

      Public
      C#
      •
      GNU General Public License v3.0
      •0•4•4•0•Updated Dec 5, 2024Dec 5, 2024

    • .github

      Public
      GNU General Public License v3.0
      •0•0•0•0•Updated Dec 3, 2024Dec 3, 2024

    • vbl-docs

      Public
      Documentation website for Virtual Brain Lab projects
      websitedocumentationneuroscience
      Python
      •0•0•2•1•Updated Nov 18, 2024Nov 18, 2024

    • pinpoint-api

      Public
      Python
      •
      MIT License
      •0•0•0•0•Updated Sep 21, 2024Sep 21, 2024

    • probe-library

      Public
      Python
      •
      MIT License
      •0•0•1•0•Updated Aug 10, 2024Aug 10, 2024

    • rig-library

      Public
      3D models that can be positioned relative to bregma in the Pinpoint scene
      MIT License
      •0•0•0•0•Updated Jul 26, 2024Jul 26, 2024

    • pinpoint-paper

      Public
      TeX
      •0•0•0•0•Updated Jun 28, 2024Jun 28, 2024

    • urchin-examples

      Public
      Jupyter Notebook
      •0•0•0•0•Updated Jun 25, 2024Jun 25, 2024

    • vbl-proxy-server

      Public
      Proxy server for Pinpoint
      JavaScript
      •0•0•2•0•Updated Jun 25, 2024Jun 25, 2024

    • electrophysiology-experiment-simulator

      Public
      Replay an electrophysiology experiment and explore data found at insertions.
      Jupyter Notebook
      •
      MIT License
      •0•1•0•0•Updated Jun 4, 2024Jun 4, 2024

    • mouse-3d-printer-magnets

      Public
      0•1•0•0•Updated May 22, 2024May 22, 2024

    • vbl-dock

      Public
      Storage server for VBL JSON files
      Python
      •
      MIT License
      •0•0•1•0•Updated Apr 7, 2024Apr 7, 2024

    • brand

      Public
      GNU General Public License v3.0
      •0•0•0•0•Updated Apr 6, 2024Apr 6, 2024

    • StopSignal

      Public
      Simple Arduino sketch that sends a stop signal over serial whenever pin 2 is low.
      C++
      •
      GNU General Public License v3.0
      •0•0•0•0•Updated Sep 11, 2023Sep 11, 2023

    • automated-unit-testing-demo

      Public
      Demo repo for automated unit testing in Python. Use this as a reference for how to perform unit tests in Python and have GitHub Actions run them.
      pythonunit-testinggithub-actions
      Python
      •
      GNU General Public License v3.0
      •0•0•0•0•Updated Aug 31, 2023Aug 31, 2023

    • mouse-3d

      Public
      0•0•0•0•Updated Aug 24, 2023Aug 24, 2023

    • vbl-echo-server

      Public
      VBL SocketIO echo server
      GNU General Public License v3.0
      •0•0•0•0•Updated Jul 11, 2023Jul 11, 2023

    • intermediate-experiment-language

      Public
      MIT License
      •0•0•1•0•Updated Jun 27, 2023Jun 27, 2023

    • Glue

      Public
      Graphics Library for Unity Experiments
      Mathematica
      •
      GNU General Public License v3.0
      •0•0•0•0•Updated Jun 11, 2023Jun 11, 2023

    • vbl-core

      Public archive
      Virtual Brain Lab core libraries and assets
      C#
      •
      GNU General Public License v3.0
      •1•0•0•0•Updated May 13, 2023May 13, 2023

    • ibl-game

      Public
      MIT License
      •0•0•0•0•Updated May 1, 2023May 1, 2023

    • IBLAverageTrial

      Public
      C#
      •
      GNU General Public License v3.0
      •0•0•1•0•Updated Dec 24, 2022Dec 24, 2022

    • nptraj-pipelines

      Public archive
      Jupyter Notebook
      •
      GNU General Public License v3.0
      •0•0•0•0•Updated Dec 12, 2022Dec 12, 2022

    • VirtualBrainLab

      Public
      C#
      •
      GNU General Public License v3.0
      •1•0•13•0•Updated Oct 17, 2022Oct 17, 2022

    • nptraj-ephys-server

      Public archive
      Neuropixels trajectory planner electrophysiology atlas server
      Jupyter Notebook
      •
      GNU General Public License v3.0
      •0•0•2•0•Updated Jun 22, 2022Jun 22, 2022