Repositories list

• gene_structure_evolution

  Public
  Code for gene structure evolution analysis

  Jupyter Notebook

  •

  MIT License

  •0•2•0•0•Updated Nov 20, 2024Nov 20, 2024

• MayroseLab

  Public
  R

  •2•4•24•0•Updated Apr 15, 2024Apr 15, 2024

• Panoramic

  Public
  A package for constructing eukaryotic pan-genomes

  Python

  •

  MIT License

  •3•6•9•0•Updated Mar 20, 2024Mar 20, 2024

• ActivaThor

  Public
  Python

  •0•0•0•0•Updated Feb 14, 2024Feb 14, 2024

• Lior

  Public
  Lior's projects

  Jupyter Notebook

  •0•0•0•0•Updated Dec 25, 2023Dec 25, 2023

• conda_tutorial

  Public
  A short tutorial about using the conda package/environment manager, specifically on Power cluster

  0•1•0•0•Updated Nov 16, 2023Nov 16, 2023

• OneTwoTree

  Public
  OneTwoTree - Phylogeny reconstruction

  Python

  •

  Other

  •3•0•1•2•Updated Aug 27, 2023Aug 27, 2023

• PGCM

  Public
  Code related to the manuscript titled "Plant pan-genomes are highly vulnerable to methodological considerations"

  Jupyter Notebook

  •

  MIT License

  •1•0•0•0•Updated Jun 12, 2023Jun 12, 2023

• PBS_batcher

  Public
  Send batches of jobs to PBS scheduler

  Python

  •0•0•0•0•Updated Nov 9, 2022Nov 9, 2022

• intro_to_plotly

  Public
  A brief introduction to interactive plotting with plotly.py

  Jupyter Notebook

  •0•0•0•0•Updated Jul 24, 2022Jul 24, 2022

• ChromevolScripts

  Public
  Perl

  •0•0•0•0•Updated Nov 23, 2021Nov 23, 2021

• ChromevolWebCGI

  Public
  Perl

  •0•0•0•0•Updated Nov 23, 2021Nov 23, 2021

• ChromevolWeb

  Public
  chromEvol webserver scripts available at http://chromevol.tau.ac.il/

  JavaScript

  •1•1•0•1•Updated Nov 23, 2021Nov 23, 2021

• chromEvol_model_adequacy

  Public
  Model adequacy for likelihood models of chromosome-number evolution

  Python

  •

  MIT License

  •0•1•1•0•Updated Sep 30, 2021Sep 30, 2021

• coursera-deep-learning-specialization

  Public
  Jupyter Notebook

  •2.3k•0•0•0•Updated Jul 6, 2021Jul 6, 2021

• Linux_text_manipulation_tutorial

  Public
  0•0•0•0•Updated Jun 29, 2021Jun 29, 2021

• chimeraBuster

  Public
  chimeraBuster is a tool for correcting chimeric gene annotations

  Python

  •

  MIT License

  •0•0•0•0•Updated May 24, 2021May 24, 2021

• OneTwoTreeScripts

  Public
  Python

  •0•0•0•0•Updated Mar 29, 2021Mar 29, 2021

• MulticrisprScripts

  Public
  Python

  •0•0•0•0•Updated Mar 29, 2021Mar 29, 2021

• MulticrisprWebCGI

  Public
  Perl

  •0•0•0•0•Updated Mar 29, 2021Mar 29, 2021

• CristaWeb

  Public
  HTML

  •0•0•0•0•Updated Mar 29, 2021Mar 29, 2021

• CristaScripts

  Public
  Python

  •0•0•0•0•Updated Mar 29, 2021Mar 29, 2021

• ModelTellerScripts

  Public
  Python

  •0•0•0•0•Updated Mar 29, 2021Mar 29, 2021

• ModelTellerWebCGI

  Public
  Python

  •0•0•0•0•Updated Mar 29, 2021Mar 29, 2021

• ModelTellerWeb

  Public
  HTML

  •0•0•0•0•Updated Mar 29, 2021Mar 29, 2021

• ClumpakScripts

  Public
  HTML

  •0•0•0•0•Updated Mar 29, 2021Mar 29, 2021

• ClumpakWebCGI

  Public
  Perl

  •0•0•0•0•Updated Mar 29, 2021Mar 29, 2021

• PhyAI_Dana

  Public
  Python

  •0•0•0•0•Updated Mar 21, 2021Mar 21, 2021

• CristaWebCGI

  Public
  Perl

  •0•0•0•0•Updated Dec 31, 2020Dec 31, 2020

• OneTwoTreeWeb

  Public
  JavaScript

  •0•0•0•0•Updated Dec 29, 2020Dec 29, 2020