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    • Plugins for expipe command line interface
      Python
      GNU General Public License v3.0
      3150Updated Dec 17, 2024Dec 17, 2024
    • exdir

      Public
      Directory structure standard for experimental pipelines.
      Python
      MIT License
      1372165Updated Dec 13, 2024Dec 13, 2024
    • Analysis for head direction cells
      Python
      GNU General Public License v3.0
      1010Updated Nov 30, 2024Nov 30, 2024
    • Analysis for spatially modulated spiking activity, e.g. place cells, grid cells
      Python
      GNU General Public License v3.0
      81650Updated Nov 21, 2024Nov 21, 2024
    • Analysis for the septum-mec project
      Jupyter Notebook
      0020Updated Jun 14, 2024Jun 14, 2024
    • cinpla-base

      Public archive
      Repository to fork when you want to start a new project
      GNU General Public License v3.0
      7230Updated Apr 8, 2024Apr 8, 2024
    • An electrodiffusive neuron-extracellular-glia model with somatodendritic interactions
      Python
      MIT License
      1000Updated Mar 3, 2024Mar 3, 2024
    • expipe

      Public
      Experiment-data management platform
      Python
      GNU General Public License v3.0
      28101Updated Jan 24, 2024Jan 24, 2024
    • Python reader for open ephys
      Python
      GNU General Public License v3.0
      11610Updated Dec 14, 2023Dec 14, 2023
    • neuronify

      Public
      An educational neural network app using the integrate-and-fire method.
      QML
      GNU General Public License v3.0
      1754590Updated Dec 4, 2023Dec 4, 2023
    • Python
      MIT License
      1000Updated Nov 17, 2023Nov 17, 2023
    • Analysis of visual stimulation e.g. drifting gratings and stuff
      Python
      GNU General Public License v3.0
      0100Updated Jan 27, 2023Jan 27, 2023
    • Python
      0202Updated Dec 27, 2022Dec 27, 2022
    • EDPRmodel

      Public
      An electrodiffusive, ion conserving Pinsky-Rinzel model with homeostatic mechanisms
      Python
      1300Updated Jan 25, 2022Jan 25, 2022
    • KNPsim

      Public
      Simulator for ion concentrations using the electroneutral "Kirchoff-Nernst-Planck" (KNP) formalism in FEniCS
      Jupyter Notebook
      GNU General Public License v3.0
      0300Updated Oct 7, 2021Oct 7, 2021
    • RippleNet

      Public
      Jupyter Notebook
      MIT License
      31120Updated Apr 4, 2021Apr 4, 2021
    • pyxona

      Public
      Python library for reading Axona files
      Python
      GNU General Public License v3.0
      2292Updated Mar 21, 2021Mar 21, 2021
    • Analysis of spiking stats e.g. correlogram etc
      Python
      GNU General Public License v3.0
      0300Updated Feb 16, 2021Feb 16, 2021
    • Drop_In

      Public
      Jupyter Notebook
      0000Updated Jan 14, 2021Jan 14, 2021
    • Library

      Public
      Overview of books for our library
      4401Updated Dec 8, 2020Dec 8, 2020
    • Measures for phase precession
      Python
      GNU General Public License v3.0
      1500Updated Sep 11, 2020Sep 11, 2020
    • Code for estimating CMRO2, presented in Sætra et al. 2020.
      Python
      0000Updated Sep 10, 2020Sep 10, 2020
    • Example code for Multi-Linear Population Analysis (MLPA), Geddes et al.
      MATLAB
      1200Updated Aug 3, 2020Aug 3, 2020
    • NeuroCNN

      Public
      AGS Script
      GNU General Public License v3.0
      4740Updated Jun 27, 2020Jun 27, 2020
    • Python
      1100Updated May 25, 2020May 25, 2020
    • Open Ephys plugin to generate software Sync events
      C++
      GNU General Public License v3.0
      2010Updated May 5, 2020May 5, 2020
    • Open Ephys plugin to combine TTL signals with logic operators
      C++
      GNU General Public License v3.0
      2021Updated May 5, 2020May 5, 2020
    • Open Ephys plugins for tracking experiments
      C++
      GNU General Public License v3.0
      201040Updated May 5, 2020May 5, 2020
    • PRmodel

      Public
      An implementation of the Pinsky-Rinzel model in Python
      Python
      0200Updated Apr 30, 2020Apr 30, 2020
    • Neuroscience specific converters for expipe
      Python
      GNU General Public License v3.0
      0080Updated Apr 27, 2020Apr 27, 2020