Bo Huang Lab

All

12 repositories

CELL-E_2
Public
Multimodal encoder-only transformer model for image-based protein predictions
deep-learning transformers language-modeling pytorch artificial-intelligence protein-sequences multi-modal attention-mechanism text-to-image protein-design
Python
•
MIT License
•1•15•0•0•Updated Dec 12, 2023Dec 12, 2023
Protein-Localization-Transformer
Public
Code for CELL-E: Biological Zero-Shot Text-to-Image Synthesis for Protein Localization Prediction
transformers language-modeling artificial-intelligence protein-sequences multi-modal attention-mechanism text-to-image deep-learning pytorch
Python
•
MIT License
•3•28•0•0•Updated Oct 1, 2023Oct 1, 2023
altFACS
Public
The alternative FACS module written for our splitHalo paper.
Jupyter Notebook
•
MIT License
•0•0•8•2•Updated Jul 6, 2023Jul 6, 2023
.github
Public
0•0•0•0•Updated May 16, 2023May 16, 2023
Cell-Analysis-Worksheets
Public
Jupyter Notebooks to Learn Image Analysis for Cellular Microscopy
image-analysis microscopy cell-biology
Jupyter Notebook
•
MIT License
•2•1•0•0•Updated Jul 30, 2021Jul 30, 2021
CP-Segmentation
Public
Segmentation for Huang Lab based on CellPose
Python
•0•1•0•0•Updated Mar 2, 2021Mar 2, 2021
EML4-ALK_FRAP
Public
Data and Scripts for EML4-ALK FRAP 2020
Jupyter Notebook
•
MIT License
•0•1•0•0•Updated Feb 17, 2021Feb 17, 2021
Transfer-Learning-Denoising
Public
Denoising Via Self Supervised Transfer Learning
transfer-learning unet noise2self image-denoising supervised-transfer-learning
Jupyter Notebook
•
MIT License
•1•12•0•0•Updated Feb 16, 2021Feb 16, 2021
RT-qPCR
Public
This workshop will run through the concepts and techniques for mRNA quantification by Reverse Transcription qPCR
Jupyter Notebook
•
MIT License
•1•0•1•0•Updated Nov 6, 2020Nov 6, 2020
Cellular_Intensity_Analysis
Public
These macros were generated to analyze total cell intensity from fluorescence images in ImageJ
Jupyter Notebook
•2•1•1•0•Updated Oct 20, 2020Oct 20, 2020
Colabratory_Workshop
Public
The first Huang lab colabratory workshop
Jupyter Notebook
•0•0•0•0•Updated May 17, 2020May 17, 2020
Wynton-Jupyter-Notebook-Server
Public
Instructions on running a jupyter notebook instance on UCSF High Performance Computer Cluster
Python
•1•2•0•0•Updated Apr 8, 2020Apr 8, 2020