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    30 repositories

    • pipelines

      Public
      Scripts to generate analysis pipelines that can be run in XNAT's container service
      Python
      •
      Other
      •3•2•183•0•Updated Dec 24, 2024Dec 24, 2024

    • xnat-docker-build

      Public
      Dockerfile
      •2•0•1•0•Updated Dec 15, 2024Dec 15, 2024

    • xnat-ingest

      Public
      Uploads exported DICOM scans and associated raw-data files to XNAT
      Python
      •
      Apache License 2.0
      •1•1•4•0•Updated Dec 2, 2024Dec 2, 2024

    • pipelines-community

      Public
      Community contributed pipelines for the Australian Imaging Service
      Jupyter Notebook
      •
      Other
      •6•0•1•0•Updated Oct 19, 2024Oct 19, 2024

    • xnat4tests

      Public
      A Python module that stands up a basic XNAT repository in a single Docker container to be used in testing pipelines interact with the XNAT API and/or container service
      Python
      •
      Other
      •5•5•3•0•Updated Oct 16, 2024Oct 16, 2024

    • medimages4tests

      Public
      Generate dummy medical images, with junk image data but realistic headers, to test imaging handling pipelines
      Python
      •
      Other
      •2•0•1•0•Updated Sep 30, 2024Sep 30, 2024

    • ais-datatypes-plugin

      Public
      XNAT plugin providing datatypes and modifications required by the Australian Imaging Service
      Java
      •0•0•0•0•Updated Sep 27, 2024Sep 27, 2024

    • xnatutils

      Public
      A collection of CLI scripts for conveniently up/downloading and listing data on/from XNAT repositories.
      xnat
      Python
      •
      Apache License 2.0
      •7•7•0•8•Updated Sep 10, 2024Sep 10, 2024

    • charts

      Public
      kuberneteshelm
      Smarty
      •
      Apache License 2.0
      •18•3•51•6•Updated Aug 1, 2024Aug 1, 2024

    • ctp-docker-build

      Public
      HTML
      •1•0•0•0•Updated Mar 19, 2024Mar 19, 2024

    • Australian-Imaging-Service.github.io

      Public
      A national initiative for secure imaging management and analysis
      ctpxnat
      HTML
      •5•0•3•3•Updated Oct 7, 2023Oct 7, 2023

    • xnatpy

      Public
      Fork of XNATPy (https://xnat.readthedocs.io/en/latest/) so it can be accessed from NSLHD
      Python
      •
      Apache License 2.0
      •0•0•0•0•Updated Sep 8, 2023Sep 8, 2023

    • python-progressbar

      Public
      Progressbar 2 - A progress bar for Python 2 and Python 3 - "pip install progressbar2"
      Python
      •
      BSD 3-Clause "New" or "Revised" License
      •102•0•0•0•Updated Aug 29, 2023Aug 29, 2023

    • openid-auth-plugin

      Public
      Java
      •
      GNU General Public License v3.0
      •1•0•1•0•Updated Aug 16, 2023Aug 16, 2023

    • ais-pipelines-workshop

      Public
      Materials for the AIS pipelines workshop at the National Imaging Facility Annual General Meeting
      Dockerfile
      •1•0•0•0•Updated Aug 15, 2023Aug 15, 2023

    • tbp-demo

      Public
      Demonstration of how to download TBP data from AIS
      Jupyter Notebook
      •0•0•0•0•Updated Aug 7, 2023Aug 7, 2023

    • configuration

      Public
      Python
      •0•0•0•0•Updated Dec 11, 2022Dec 11, 2022

    • pydra-nipreps

      Public
      Miscellaneous task interfaces used in smriprep ported from Nipype to Pydra
      Python
      •0•0•0•1•Updated Nov 2, 2022Nov 2, 2022

    • pydra

      Public
      Pydra Dataflow Engine
      Python
      •
      Other
      •59•0•0•0•Updated Sep 28, 2022Sep 28, 2022

    • xnat-build

      Public
      HCL
      •
      Apache License 2.0
      •4•0•5•0•Updated Jul 2, 2022Jul 2, 2022

    • deepdicomsort4xnat

      Public
      An implementation of the deep dicom sort tool that operates on XNAT MR sessions
      Python
      •0•0•0•0•Updated Jun 29, 2022Jun 29, 2022

    • ctp-build

      Public
      Makefile
      •
      Apache License 2.0
      •2•0•2•0•Updated Jun 16, 2022Jun 16, 2022

    • Instrument-Upload-Configs

      Public
      This houses the instrument scripts to upload non-dicom data to XNAT
      xnat
      Shell
      •0•1•4•0•Updated Mar 4, 2022Mar 4, 2022

    • xnat-web

      Public
      0•0•0•0•Updated Jan 23, 2022Jan 23, 2022

    • docker-images

      Public
      Dockerfiles and metadata for XNAT's container service
      Python
      •21•0•0•5•Updated Jan 14, 2022Jan 14, 2022

    • .github

      Public
      GitHub Organisational artifacts
      Apache License 2.0
      •0•0•0•0•Updated Jul 21, 2021Jul 21, 2021

    • msbir-xnat-download-tool

      Public
      MSBASE Download Tool Installers for Windows and MacOS
      0•0•0•0•Updated Jul 7, 2021Jul 7, 2021

    • qc-pipelines

      Public
      A collection of QC pipelines and configuration files designed to run in the XNAT container service
      xnatxnat-pipelinespipelines
      Dockerfile
      •0•1•0•0•Updated May 24, 2021May 24, 2021

    • xnat-openid-auth-plugin

      Public
      Java
      •
      GNU General Public License v3.0
      •1•3•6•0•Updated May 19, 2021May 19, 2021

    • s3fs-build

      Public
      Shell
      •
      Apache License 2.0
      •0•0•0•0•Updated Jan 22, 2021Jan 22, 2021