Adding initial obspack creation logic #2017
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| name: OpenGHG tests | |
| on: | |
| push: | |
| branches: [master, devel] | |
| tags: | |
| - "*" | |
| paths-ignore: | |
| - 'CHANGELOG.md' | |
| pull_request: | |
| branches: [master, devel] | |
| paths-ignore: | |
| - 'CHANGELOG.md' | |
| workflow_dispatch: | |
| jobs: | |
| test: | |
| name: Run the tests | |
| runs-on: ${{ matrix.operating-system }} | |
| if: "!contains(github.event.head_commit.message, '[skip ci]')" | |
| strategy: | |
| max-parallel: 4 | |
| fail-fast: false | |
| matrix: | |
| operating-system: [ubuntu-latest] | |
| python-version: ["3.10", "3.11", "3.12"] | |
| steps: | |
| - name: Checkout | |
| uses: actions/checkout@v3 | |
| - name: Set up Python ${{ matrix.python-version }} | |
| uses: actions/setup-python@v4 | |
| with: | |
| python-version: ${{ matrix.python-version }} | |
| cache: "pip" | |
| - name: Format code with black | |
| run: | | |
| python -m pip install black | |
| black --check openghg/ | |
| - name: Lint with flake8 | |
| run: | | |
| python -m pip install --upgrade pip wheel setuptools flake8 | |
| flake8 openghg/ --count --statistics | |
| - name: Install openghg | |
| run: | | |
| pip install -r requirements-dev.txt | |
| pip install . | |
| - name: Run mypy | |
| run: | | |
| mypy --python-version ${{ matrix.python-version }} openghg/ | |
| - name: Create mock cdsapi config file | |
| run: | | |
| echo $'url: https://www.openghg.org\nkey: 00000:f5690ad7-test-test-test-6fb0573991ca\n' > ~/.cdsapirc | |
| - name: Install udunits package for CF compliance checks | |
| run: | | |
| sudo apt-get install libudunits2-0 | |
| - name: Test with pytest | |
| run: | | |
| pip install --upgrade pytest | |
| pytest -v --run-cfchecks | |
| docs: | |
| name: Build and deploy the documentation | |
| if: github.event_name == 'push' && startsWith(github.ref, 'refs/tags') && !contains(github.ref_name, '-') && contains(github.ref_name, '.') | |
| runs-on: ubuntu-latest | |
| needs: ["test"] | |
| steps: | |
| - uses: actions/checkout@v3 | |
| - name: Set up Python | |
| uses: actions/setup-python@v4 | |
| with: | |
| python-version: "3.10" | |
| cache: "pip" | |
| - name: Install openghg | |
| run: | | |
| pip install --upgrade pip wheel setuptools | |
| pip install . | |
| - name: Setup default config | |
| run: openghg --default-config | |
| - name: Install pandoc and requirements | |
| run: | | |
| sudo apt-get install -yq pandoc | |
| pip install -r requirements-doc.txt | |
| - name: Build documentation | |
| run: | | |
| cd doc | |
| make | |
| - name: Deploy to GitHub pages | |
| uses: JamesIves/[email protected] | |
| with: | |
| branch: gh-pages | |
| folder: "doc/build/html" | |
| clean: true | |
| release_pypi: | |
| name: Build and publish Python distributions 📦 to PyPI and TestPyPI | |
| runs-on: ubuntu-latest | |
| needs: ["test", "docs"] | |
| if: github.event_name == 'push' && startsWith(github.ref, 'refs/tags') && !contains(github.ref_name, '-') && contains(github.ref_name, '.') | |
| steps: | |
| - uses: actions/checkout@v3 | |
| - name: Set up Python 3.10 | |
| uses: actions/setup-python@v4 | |
| with: | |
| python-version: "3.10" | |
| cache: "pip" | |
| - name: Install pypa/build | |
| run: | | |
| pip install --upgrade build | |
| - name: Build a binary wheel and a source tarball | |
| run: | | |
| python -m build --sdist --wheel --outdir dist/ | |
| - name: Publish distribution 📦 to Test PyPI | |
| uses: pypa/gh-action-pypi-publish@f8c70e705ffc13c3b4d1221169b84f12a75d6ca8 | |
| with: | |
| password: ${{ secrets.TEST_PYPI_API_TOKEN }} | |
| repository_url: https://test.pypi.org/legacy/ | |
| - name: Publish distribution 📦 to PyPI | |
| uses: pypa/gh-action-pypi-publish@f8c70e705ffc13c3b4d1221169b84f12a75d6ca8 | |
| with: | |
| password: ${{ secrets.PYPI_API_TOKEN }} | |
| release_conda: | |
| name: Build and publish conda package | |
| runs-on: ubuntu-latest | |
| needs: ["test", "docs"] | |
| if: github.event_name == 'push' && startsWith(github.ref, 'refs/tags') && !contains(github.ref_name, '-') && contains(github.ref_name, '.') | |
| defaults: | |
| run: | |
| shell: bash -el {0} | |
| steps: | |
| - uses: actions/checkout@v3 | |
| - uses: mamba-org/setup-micromamba@875557da4ee020f18df03b8910a42203fbf02da1 | |
| with: | |
| init-shell: bash | |
| - name: Build and push the conda package | |
| run: | | |
| micromamba create -n openghg_build anaconda-client boa conda-verify -c conda-forge | |
| micromamba activate openghg_build | |
| conda config --append channels openghg | |
| mkdir ${{ github.workspace }}/build | |
| conda mambabuild --croot ${{ github.workspace }}/build recipes -c conda-forge | |
| env: | |
| GIT_TAG: ${{ github.ref_name }} | |
| - name: Publish build to Anaconda | |
| run: | | |
| micromamba activate openghg_build | |
| BUILD_DIR=${GITHUB_WORKSPACE}/build | |
| BUILD=$(find "$BUILD_DIR" -name '*.tar.bz2') | |
| anaconda --token "$ANACONDA_TOKEN" upload --user openghg --label main "$BUILD" | |
| env: | |
| ANACONDA_TOKEN: ${{ secrets.ANACONDA_TOKEN_EXP_2025_08_14 }} | |
| GIT_TAG: ${{ github.ref_name }} |