virtual4c assigning nan to point of view #443
claudiarabu
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Mh can you clarify in some more detail why setting bins within the viewpoint to Nan is misleading? I think that should at least be the default behavior... |
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Hi!
I was using the virtual4c function of cooltools and noticed that the point of view is assigned as nan, but this might lead to some confusion as also null (= not happening) interactions are assigned as nan. Also, for plotting I substituted every nan with 0 values, but the resulting graph at around the pov bins was of course a bit misleading.
What I did was changing the cooltools/api/virtual4c.py to assign value 1 to the pov bins, but I guess another option could be to assign 0 to null interactions and nan to the pov bins.
Besides that, cool tools indeed! :)
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