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Update documentation
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actions-user committed Nov 2, 2023
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4 changes: 2 additions & 2 deletions User-Manual/Plugins/Probe-Viewer.html
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Expand Up @@ -554,10 +554,10 @@ <h3>Via Pinpoint<a class="headerlink" href="#via-pinpoint" title="Permalink to t
</section>
<section id="via-neuropixels-trajectory-explorer">
<h3>Via Neuropixels Trajectory Explorer<a class="headerlink" href="#via-neuropixels-trajectory-explorer" title="Permalink to this heading">#</a></h3>
<p><a class="reference external" href="https://github.com/petersaj/neuropixels_trajectory_explorer/wiki">Neuropixels Trajectory Explorer</a> insertion-planning software that can be run from within MATLAB or as a standalone application.</p>
<p><a class="reference external" href="https://github.com/petersaj/neuropixels_trajectory_explorer/wiki">Neuropixels Trajectory Explorer</a> is insertion-planning software that can be run from within MATLAB or as a standalone application.</p>
<img alt="Connecting NTE to recording software" src="../../_images/probeviewer-05.png" />
<p>From the “Connect” menu, select “Recording” then “OpenEphys”.</p>
<p>The Probe Viewer has a <a class="reference internal" href="Neuropixels-PXI.html#neuropixelspxi"><span class="std std-ref">Neuropixels PXI</span></a> plugin upstream, the anatomical overlay should update every time the probe in moved in Neuropixels Trajectory explorer.</p>
<p>Assuming the Probe Viewer has a <a class="reference internal" href="Neuropixels-PXI.html#neuropixelspxi"><span class="std std-ref">Neuropixels PXI</span></a> plugin upstream, the anatomical overlay should update every time the probe in moved in Neuropixels Trajectory explorer.</p>
<p>See <a class="reference external" href="https://github.com/petersaj/neuropixels_trajectory_explorer/wiki/Recording-software-interfacing">this tutorial</a> for additional information on how to send anatomical information from Neuropixels Trajectory Explorer to Open Ephys.</p>
</section>
<section id="via-config-messages">
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4 changes: 2 additions & 2 deletions _sources/User-Manual/Plugins/Probe-Viewer.rst.txt
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Expand Up @@ -86,14 +86,14 @@ See `this tutorial <https://virtualbrainlab.org/pinpoint/tutorial.html#api>`__ f
Via Neuropixels Trajectory Explorer
------------------------------------

`Neuropixels Trajectory Explorer <https://github.com/petersaj/neuropixels_trajectory_explorer/wiki>`__ insertion-planning software that can be run from within MATLAB or as a standalone application.
`Neuropixels Trajectory Explorer <https://github.com/petersaj/neuropixels_trajectory_explorer/wiki>`__ is insertion-planning software that can be run from within MATLAB or as a standalone application.

.. image:: ../../_static/images/plugins/probeviewer/probeviewer-05.png
:alt: Connecting NTE to recording software

From the "Connect" menu, select "Recording" then "OpenEphys".

The Probe Viewer has a :ref:`neuropixelspxi` plugin upstream, the anatomical overlay should update every time the probe in moved in Neuropixels Trajectory explorer.
Assuming the Probe Viewer has a :ref:`neuropixelspxi` plugin upstream, the anatomical overlay should update every time the probe in moved in Neuropixels Trajectory explorer.

See `this tutorial <https://github.com/petersaj/neuropixels_trajectory_explorer/wiki/Recording-software-interfacing>`__ for additional information on how to send anatomical information from Neuropixels Trajectory Explorer to Open Ephys.

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2 changes: 1 addition & 1 deletion searchindex.js

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