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| Original file line number | Diff line number | Diff line change |
|---|---|---|
| @@ -0,0 +1,165 @@ | ||
| cff-version: 1.2.0 | ||
| title: Forest | ||
| message: "If you use Forest, please cite it using the metadata from this file." | ||
| type: software | ||
| authors: | ||
| - family-names: Clement | ||
| given-names: Zachary | ||
| - family-names: Efstathiadis | ||
| given-names: Georgios | ||
| orcid: "https://orcid.org/0009-0006-2278-1882" | ||
| - family-names: Huang | ||
| given-names: Emily J. | ||
| orcid: "https://orcid.org/0000-0003-1964-5231" | ||
| - family-names: Karas | ||
| given-names: Marta | ||
| orcid: "https://orcid.org/0000-0001-5889-3970" | ||
| - family-names: Liu | ||
| given-names: Greyson | ||
| - family-names: Onnela | ||
| given-names: Jukka-Pekka | ||
| orcid: "https://orcid.org/0000-0001-6613-8668" | ||
| - family-names: Straczkiewicz | ||
| given-names: Marcin | ||
| orcid: "https://orcid.org/0000-0002-8703-4451" | ||
| repository-code: "https://github.com/onnela-lab/forest" | ||
| url: "https://forest.beiwe.org" | ||
| abstract: "Forest is a library for analyzing smartphone-based high-throughput digital phenotyping data." | ||
| keywords: | ||
| - "digital phenotyping" | ||
| - smartphone | ||
| - statistics | ||
| - accelerometer | ||
| - GPS | ||
| license: BSD-3-Clause | ||
| references: | ||
| - authors: | ||
| - family-names: Straczkiewicz | ||
| given-names: Marcin | ||
| affiliation: "Department of Biostatistics, Harvard University" | ||
| orcid: "https://orcid.org/0000-0002-8703-4451" | ||
| - family-names: Huang | ||
| given-names: Emily J. | ||
| affiliation: "Department of Statistical Sciences, Wake Forest University" | ||
| orcid: "https://orcid.org/0000-0003-1964-5231" | ||
| - family-names: Onnela | ||
| given-names: Jukka-Pekka | ||
| affiliation: "Department of Biostatistics, Harvard T.H. Chan School of Public Health, Harvard University" | ||
| orcid: "https://orcid.org/0000-0001-6613-8668" | ||
| doi: 10.1038/s41746-022-00745-z | ||
| journal: "npj Digital Medicine" | ||
| month: 2 | ||
| start: 29 | ||
| title: "A “one-size-fits-most” walking recognition method for smartphones, smartwatches, and wearable accelerometers" | ||
| type: article | ||
| volume: 6 | ||
| year: 2023 | ||
| - authors: | ||
| - family-names: Huang | ||
| given-names: Emily J. | ||
| affiliation: "Department of Mathematics and Statistics, Wake Forest University" | ||
| orcid: "https://orcid.org/0000-0003-1964-5231" | ||
| - family-names: Yan | ||
| given-names: Kebin | ||
| affiliation: "Department of Biostatistics, Epidemiology, and Informatics, University of Pennsylvania" | ||
| - family-names: Onnela | ||
| given-names: Jukka-Pekka | ||
| affiliation: "Department of Biostatistics, Harvard T.H. Chan School of Public Health, Harvard University" | ||
| orcid: "https://orcid.org/0000-0001-6613-8668" | ||
| doi: 10.3390/s22072618 | ||
| issue: 7 | ||
| journal: Sensors | ||
| start: 2618 | ||
| title: "Smartphone-Based Activity Recognition Using Multistream Movelets Combining Accelerometer and Gyroscope Data" | ||
| type: article | ||
| volume: 22 | ||
| year: 2022 | ||
| - authors: | ||
| - family-names: Liu | ||
| given-names: Guangyu | ||
| affiliation: "Department of Biostatistics, Harvard T.H. Chan School of Public Health, Harvard University" | ||
| - family-names: Onnela | ||
| given-names: Jukka-Pekka | ||
| affiliation: "Department of Biostatistics, Harvard T.H. Chan School of Public Health, Harvard University" | ||
| orcid: "https://orcid.org/0000-0001-6613-8668" | ||
| doi: 10.1093/jamia/ocab069 | ||
| issue: 8 | ||
| journal: "Journal of the American Medical Informatics Association" | ||
| start: 1777 | ||
| title: "Bidirectional imputation of spatial GPS trajectories with missingness using sparse online Gaussian Process" | ||
| type: article | ||
| volume: 28 | ||
| year: 2021 | ||
| - authors: | ||
| - family-names: Onnela | ||
| given-names: Jukka-Pekka | ||
| affiliation: "Department of Biostatistics, Harvard T.H. Chan School of Public Health, Harvard University" | ||
| orcid: "https://orcid.org/0000-0001-6613-8668" | ||
| - family-names: Dixon | ||
| given-names: Caleb | ||
| affiliation: "Zagaran, Inc." | ||
| - family-names: Griffin | ||
| given-names: Keary | ||
| affiliation: "Rocket Farm Studios" | ||
| - family-names: Jaenicke | ||
| given-names: Tucker | ||
| affiliation: "Zagaran, Inc." | ||
| - family-names: Minowada | ||
| given-names: Leila | ||
| affiliation: "Zagaran, Inc." | ||
| - family-names: Esterkin | ||
| given-names: Sean | ||
| affiliation: "Zagaran, Inc." | ||
| - family-names: Siu | ||
| given-names: Alvin | ||
| affiliation: "Zagaran, Inc." | ||
| - family-names: Zagorsky | ||
| given-names: Josh | ||
| affiliation: "Zagaran, Inc." | ||
| - family-names: Jones | ||
| given-names: Eli | ||
| affiliation: "Zagaran, Inc." | ||
| doi: 10.21105/joss.03417 | ||
| issue: 68 | ||
| journal: "Journal of Open Source Software" | ||
| month: 12 | ||
| start: 3417 | ||
| title: "Beiwe: A data collection platform for high-throughput digital phenotyping" | ||
| type: article | ||
| volume: 6 | ||
| year: 2021 | ||
| - authors: | ||
| - family-names: Barnett | ||
| given-names: Ian | ||
| affiliation: "Department of Biostatistics, Epidemiology, and Informatics, University of Pennsylvania" | ||
| orcid: "https://orcid.org/0000-0003-3256-5703" | ||
| - family-names: Onnela | ||
| given-names: Jukka-Pekka | ||
| affiliation: "Department of Biostatistics, Harvard T.H. Chan School of Public Health, Harvard University" | ||
| orcid: "https://orcid.org/0000-0001-6613-8668" | ||
| doi: 10.1093/biostatistics/kxy059 | ||
| end: e112 | ||
| issue: 2 | ||
| journal: Biostatistics | ||
| start: e98 | ||
| title: "Inferring mobility measures from GPS with missing data" | ||
| type: article | ||
| volume: 21 | ||
| year: 2020 | ||
| - authors: | ||
| - family-names: Huang | ||
| given-names: Emily J. | ||
| affiliation: "Department of Mathematics and Statistics, Wake Forest University" | ||
| orcid: "https://orcid.org/0000-0003-1964-5231" | ||
| - family-names: Onnela | ||
| given-names: Jukka-Pekka | ||
| affiliation: "Department of Biostatistics, Harvard T.H. Chan School of Public Health, Harvard University" | ||
| orcid: "https://orcid.org/0000-0001-6613-8668" | ||
| doi: 10.3390/s20133706 | ||
| issue: 13 | ||
| journal: Sensors | ||
| start: 3706 | ||
| title: "Augmented movelet method for activity classification using smartphone gyroscope and accelerometer data" | ||
| type: article | ||
| volume: 20 | ||
| year: 2020 |
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