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alexzwanenburg committed Jul 4, 2024
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# Statement of need

Lack of standardised radiomics software is one of the reasons for poor translation of radiomics tools to the clinic.
The Image Biomarker Standardisation Initiative (IBSI) has created reference standards for radiomics software: 1. a
reference standard for basic image processing and feature extraction steps [@Zwanenburg2020-go]; and 2. a reference
The Image Biomarker Standardisation Initiative (IBSI) created two reference standards for radiomics software: firstly, a
reference standard for basic image processing and feature extraction steps [@Zwanenburg2020-go]; and secondly a reference
standard for image filters [@Whybra2024-yb]. There is currently a lack of fully IBSI-compliant radiomics
packages in Python, which is important for the radiomics field because Python is used to interface with machine learning
and deep learning packages such as `scikit-learn` and `pytorch`. `mirp` is intended to fill this gap. It provides a
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one hand, and to externally reproduce and validate results of other researchers. It was originally created in 2016 and
regularly updated to conform with the IBSI reference standards and to improve usability. Previous versions of `mirp`
were used by e.g. @Leger2017-si, @Zwanenburg2019-jg, @Shahzadi2022-wk and @Bettinelli2022-ml. Recently, `mirp` was used
as a radiomics engine for the `RadTract` Python package [@Neher2024-ze]. The latest major version (2) provides major
as a radiomics engine for the `RadTract` Python package [@Neher2024-ze]. Updates in the recent major release series provide major
improvements in user experience with a unified API, better documentation, and easier installation using `pip`.

`mirp` follows an end-to-end design principle and abstracts away intermediate steps for the user. In this sense it
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