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@omicsEye

omicsEye

Understanding biology via novel machine learning, statistical, and visualization techniques on omics data for public health and precision medicine

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  1. omeClust omeClust Public

    multi-resolution clustering of omics data

    Python 13 5

  2. deepbreaks deepbreaks Public

    deepBreaks , a computational method, aims to identify important changes in association with the phenotype of interest using multi-alignment sequencing data from a population.

    Jupyter Notebook 9 3

  3. Workshop Workshop Public

    omicsEye workshops

    R 3

  4. omePath omePath Public

    omePath: Omics Pathway Enrichment Analysis

    R 2 4

  5. covid-19 covid-19 Public

    Scripts, data, and analysis of COVID-19

    R 2

  6. massSight massSight Public

    An R package for the alignment and scaling of LC-MS metabolomics data

    R 2

Repositories

Showing 10 of 26 repositories
  • PREMIER Public

    Analysis for plasma branched-chain amino acid levels and cardiovascular disease risk factors: a longitudinal analysis of a lifestyle trial

    omicsEye/PREMIER’s past year of commit activity
    R 0 0 0 0 Updated Nov 22, 2024
  • waveome Public

    This is a repository that contains a python package for automated longitudinal data analysis using Gaussian processes.

    omicsEye/waveome’s past year of commit activity
    Jupyter Notebook 1 MIT 0 0 1 Updated Nov 13, 2024
  • massSight Public

    An R package for the alignment and scaling of LC-MS metabolomics data

    omicsEye/massSight’s past year of commit activity
    R 2 MIT 0 2 0 Updated Nov 12, 2024
  • cellSight Public
    omicsEye/cellSight’s past year of commit activity
    R 0 MIT 0 0 0 Updated Nov 8, 2024
  • covid-19 Public

    Scripts, data, and analysis of COVID-19

    omicsEye/covid-19’s past year of commit activity
    R 2 0 0 0 Updated Nov 8, 2024
  • omePath Public

    omePath: Omics Pathway Enrichment Analysis

    omicsEye/omePath’s past year of commit activity
    R 2 4 1 0 Updated Nov 6, 2024
  • massSightCafe Public
    omicsEye/massSightCafe’s past year of commit activity
    R 0 0 0 0 Updated Oct 29, 2024
  • omicsArt Public

    statistical analysis and visualization for omics data

    omicsEye/omicsArt’s past year of commit activity
    R 1 0 0 0 Updated Oct 2, 2024
  • pubSight Public
    omicsEye/pubSight’s past year of commit activity
    Jupyter Notebook 0 MIT 0 0 0 Updated Sep 30, 2024
  • deepbreaks Public

    deepBreaks , a computational method, aims to identify important changes in association with the phenotype of interest using multi-alignment sequencing data from a population.

    omicsEye/deepbreaks’s past year of commit activity
    Jupyter Notebook 9 3 0 0 Updated Aug 15, 2024
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