Original Upheno

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Chris Mungall edited this page May 12, 2016 · 1 revision

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* crossSpeciesPheno.obo

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* Sebastian Köhler, Sandra C Doelken, Barbara J Ruef, Sebastian Bauer, Nicole Washington, Monte Westerfield, George Gkoutos, Paul Schofield, Damian Smedley, Suzanna E Lewis, Peter N Robinson, Christopher J Mungall (2013) Construction and accessibility of a cross-species phenotype ontology along with gene annotations for biomedical research F1000Research

The cross-species phenotype ontologies is constructed using

* [HP]
* [MP]
* [ZP]

And associated OWL axioms. Classes inferred to be equivalent are merged.

Note that it is also possible to load individual sets by grouping taxon:

* http://purl.obolibrary.org/obo/upheno/mammal.owl ([MP] plus [HP])
* http://purl.obolibrary.org/obo/upheno/vertebrate.owl (above plus [ZP])
* http://purl.obolibrary.org/obo/upheno/metazoa.owl (above plus [WBPhenotype]) - todo: add [DPO]
* TODO - eukartote, all