new term aorta-gonad-mesonephros #1
Workflow file for this run
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name: Assign Reviewers for Uberon | |
on: | |
pull_request: | |
types: [opened, synchronize] | |
paths: | |
- src/ontology/uberon-edit.obo | |
jobs: | |
assign-reviewer: | |
runs-on: ubuntu-latest | |
steps: | |
- name: Checkout code | |
uses: actions/checkout@v3 | |
with: | |
fetch-depth: 0 # Fetch the entire history for all branches | |
- name: Fetch base branch | |
run: | | |
git fetch origin ${{ github.base_ref }} # Fetch base branch explicitly | |
- name: Check if equivalent class axiom was edited | |
id: check_intersection_of | |
run: | | |
git diff origin/${{ github.base_ref }}...HEAD -- src/ontology/uberon-edit.obo > diff.txt | |
if grep -E '^(-|\+)intersection_of:' diff.txt; then | |
echo "intersection_of_found=true" >> $GITHUB_ENV | |
else | |
echo "intersection_of_found=false" >> $GITHUB_ENV | |
fi | |
- name: Assign reviewer | |
if: env.intersection_of_found == 'true' | |
env: | |
GH_TOKEN: ${{ secrets.GITHUB_TOKEN }} | |
run: | | |
gh api repos/${{ github.repository }}/pulls/${{ github.event.pull_request.number }}/requested_reviewers \ | |
--method POST \ | |
--field reviewers[]=cmungall | |
- name: Block PR by requesting changes | |
if: env.intersection_of_found == 'true' | |
env: | |
GH_TOKEN: ${{ secrets.GITHUB_TOKEN }} | |
run: | | |
gh pr review ${{ github.event.pull_request.number }} --request-changes --body "Changes detected in \`src/ontology/uberon-edit.obo\` involving \`intersection_of\`. Review by specific Uberon Core Team member is required." |