Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

Sign up for GitHub

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Jump to bottom

Adjust hierarchy of somatosensory neurons (sensu Teleostei) #2751

Open
wants to merge 3 commits into
base: master
Choose a base branch
from
+28 −2
Open

Adjust hierarchy of somatosensory neurons (sensu Teleostei) #2751

Changes from all commits
Commits
Show all changes
3 commits
Select commit Hold shift + click to select a range
a4640c1
Adjust hierarchy of somatosensory neurons (sensu Teleostei)
AvolaAmg Nov 13, 2024
70e1c7e
Merge branch 'master' into Adjust-hierarchy-of-somatosensory-neurons-…
AvolaAmg Nov 14, 2024
730adc5
Merge branch 'master' into Adjust-hierarchy-of-somatosensory-neurons-…
Caroline-99 Nov 14, 2024
File filter

Filter by extension

Filter by extension
Conversations
Failed to load comments.
Loading
Jump to
Jump to file
Failed to load files.
Loading
Diff view
Diff view
30 changes: 28 additions & 2 deletions src/ontology/cl-edit.owl
View file
Open in desktop
Original file line number Diff line number Diff line change
Expand Up @@ -3087,6 +3087,8 @@ Declaration(Class(obo:CL_4042033))
Declaration(Class(obo:CL_4042034))
Declaration(Class(obo:CL_4042035))
Declaration(Class(obo:CL_4042036))
Declaration(Class(obo:CL_4042037))
Declaration(Class(obo:CL_4042038))
Declaration(Class(obo:CL_4047006))
Declaration(Class(obo:CL_4047007))
Declaration(Class(obo:CL_4047011))
Expand Down Expand Up @@ -8014,7 +8016,7 @@ SubClassOf(obo:CL_0000529 obo:CL_0000710)
AnnotationAssertion(Annotation(oboInOwl:hasDbXref "PMID:1842357") Annotation(oboInOwl:hasDbXref "doi:10.1242/dev.108.1.121") obo:IAO_0000115 obo:CL_0000530 "A neuron that develops during the early segmentation stages in teleosts, before the neural tube is formed.")
AnnotationAssertion(rdfs:label obo:CL_0000530 "primary neuron (sensu Teleostei)")
SubClassOf(obo:CL_0000530 obo:CL_0000540)
SubClassOf(obo:CL_0000530 ObjectSomeValuesFrom(obo:RO_0002100 obo:UBERON_0001017))
SubClassOf(obo:CL_0000530 ObjectSomeValuesFrom(obo:RO_0002100 obo:UBERON_0002240))
SubClassOf(Annotation(obo:IAO_0000233 "https://github.com/obophenotype/cell-ontology/pull/1950") obo:CL_0000530 ObjectSomeValuesFrom(obo:RO_0002162 obo:NCBITaxon_32443))

# Class: obo:CL_0000531 (primary sensory neuron (sensu Teleostei))
Expand All @@ -8025,6 +8027,10 @@ EquivalentClasses(obo:CL_0000531 ObjectIntersectionOf(obo:CL_0000101 obo:CL_0000

# Class: obo:CL_0000532 (CAP motoneuron)

AnnotationAssertion(Annotation(oboInOwl:hasDbXref "PMID:17971221") Annotation(oboInOwl:hasDbXref "PMID:35431796") obo:IAO_0000115 obo:CL_0000532 "A primary motor neuron with its soma in the caudal region of a spinal cord. The axon of this motoneuron exit the spinal cord from one single point and innervates muscles from its lateral region.")
AnnotationAssertion(Annotation(oboInOwl:hasDbXref "PMID:3746410") oboInOwl:hasExactSynonym obo:CL_0000532 "CaP motorneuron")
AnnotationAssertion(Annotation(oboInOwl:hasDbXref "PMID:17971221") oboInOwl:hasRelatedSynonym obo:CL_0000532 "cap cell")
AnnotationAssertion(Annotation(oboInOwl:hasDbXref "PMID:18077593") oboInOwl:hasRelatedSynonym obo:CL_0000532 "caudal primary motor neuron")
AnnotationAssertion(rdfs:label obo:CL_0000532 "CAP motoneuron")
SubClassOf(obo:CL_0000532 obo:CL_0000533)

Expand All @@ -8047,8 +8053,9 @@ SubClassOf(obo:CL_0000534 obo:CL_0000530)
AnnotationAssertion(Annotation(oboInOwl:hasDbXref "PMID:1842357") Annotation(oboInOwl:hasDbXref "doi:10.1242/dev.108.1.121") obo:IAO_0000115 obo:CL_0000535 "A neuron of teleosts that develops later than a primary neuron, typically during the larval stages.")
AnnotationAssertion(rdfs:label obo:CL_0000535 "secondary neuron (sensu Teleostei)")
SubClassOf(obo:CL_0000535 obo:CL_0000540)
SubClassOf(obo:CL_0000535 ObjectSomeValuesFrom(obo:RO_0002100 obo:UBERON_0001017))
SubClassOf(obo:CL_0000535 ObjectSomeValuesFrom(obo:RO_0002100 obo:UBERON_0002240))
SubClassOf(Annotation(obo:IAO_0000233 "https://github.com/obophenotype/cell-ontology/pull/1950") obo:CL_0000535 ObjectSomeValuesFrom(obo:RO_0002162 obo:NCBITaxon_32443))
SubClassOf(obo:CL_0000535 ObjectSomeValuesFrom(obo:RO_0002202 obo:UBERON_0002342))

# Class: obo:CL_0000536 (secondary motor neuron (sensu Teleostei))

Expand Down Expand Up @@ -32739,6 +32746,25 @@ AnnotationAssertion(Annotation(oboInOwl:hasDbXref "PMID:38020069") rdfs:comment
AnnotationAssertion(rdfs:label obo:CL_4042036 "melanin-concentrating hormone neuron"@en)
SubClassOf(obo:CL_4042036 obo:CL_2000029)

# Class: obo:CL_4042037 (middle primary motoneuron)

AnnotationAssertion(Annotation(oboInOwl:hasDbXref "PMID:35431796") Annotation(oboInOwl:hasDbXref "PMID:3746410") obo:IAO_0000115 obo:CL_4042037 "A type of primary motor neuron located in the middle region of the spinal cord. This primary motor neuron type is characterized by their distinct axonal pathways that innervate the middle trunk muscles.")
AnnotationAssertion(terms:contributor obo:CL_4042037 <https://orcid.org/0000-0002-0098-8958>)
AnnotationAssertion(terms:date obo:CL_4042037 "2024-11-13T13:39:28Z"^^xsd:dateTime)
AnnotationAssertion(oboInOwl:hasDbXref obo:CL_4042037 "ZFA:0005179")
AnnotationAssertion(Annotation(oboInOwl:hasDbXref "PMID:3746410") Annotation(oboInOwl:hasSynonymType obo:OMO_0003000) oboInOwl:hasRelatedSynonym obo:CL_4042037 "MiP")
AnnotationAssertion(rdfs:label obo:CL_4042037 "middle primary motoneuron"@en)
SubClassOf(obo:CL_4042037 obo:CL_0000533)

# Class: obo:CL_4042038 (rostral primary motorneuron)

AnnotationAssertion(Annotation(oboInOwl:hasDbXref "PMID:35431796") Annotation(oboInOwl:hasDbXref "PMID:3746410") obo:IAO_0000115 obo:CL_4042038 "A type of primary motor neuron situated in the rostral region of the spinal cord. RoP neurons extend their axons to innervate the dorsal trunk musculature.")
AnnotationAssertion(terms:contributor obo:CL_4042038 <https://orcid.org/0000-0002-0098-8958>)
AnnotationAssertion(terms:date obo:CL_4042038 "2024-11-13T13:42:01Z"^^xsd:dateTime)
AnnotationAssertion(Annotation(oboInOwl:hasDbXref "PMID:3746410") Annotation(oboInOwl:hasSynonymType obo:OMO_0003000) oboInOwl:hasRelatedSynonym obo:CL_4042038 "RoP")
AnnotationAssertion(rdfs:label obo:CL_4042038 "rostral primary motorneuron"@en)
SubClassOf(obo:CL_4042038 obo:CL_0000533)

# Class: obo:CL_4047006 (fetal artery endothelial cell)

AnnotationAssertion(Annotation(oboInOwl:hasDbXref "PMID:34497389") obo:IAO_0000115 obo:CL_4047006 "An endothelial cell that lines an artery in the fetal circulatory system.")
Expand Down
Loading