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Add NCIT measurement related traits
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Fix #163
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@rays22
rays22 committed Oct 24, 2023
1 parent ea6df33 commit 1d22adb
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4 changes: 4 additions & 0 deletions src/patterns/data/default/entity_attribute.tsv
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Expand Up @@ -4341,3 +4341,7 @@ OBA:2045294 asparaginase activity GO:0006530 asparagine catabolic process PATO:0
OBA:2045295 brain connectivity attribute UBERON:0000955 brain PATO:0000141 structure https://orcid.org/0000-0001-8314-2140
OBA:2045296 defense response to other organism process attribute GO:0098542 defense response to other organism PATO:0001236 process quality https://orcid.org/0000-0001-8314-2140
OBA:2045328 DNA methylation level GO:0006306 DNA methylation PATO:0002062 physical quality of a process https://orcid.org/0000-0001-8314-2140
OBA:2045372 gestational blood glucose level UBERON:0009097 gravid organism OBA:VT0000188 blood glucose amount https://orcid.org/0000-0001-8314-2140
OBA:2045389 leukocyte ratio CL:0000738 leukocyte PATO:0001470 proportionality to https://orcid.org/0000-0001-8314-2140
OBA:2045390 basophil ratio CL:0000767 basophil PATO:0001470 proportionality to https://orcid.org/0000-0001-8314-2140
OBA:2045391 eosinophil ratio CL:0000771 eosinophil PATO:0001470 proportionality to https://orcid.org/0000-0001-8314-2140
14 changes: 12 additions & 2 deletions src/patterns/data/default/entity_attribute_location.tsv
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Expand Up @@ -1850,7 +1850,7 @@ OBA:2041763 level of Golgi phosphoprotein 3 in blood serum PR:000008142 Golgi ph
OBA:2041764 level of Golgi phosphoprotein 3-like in blood serum PR:000008143 Golgi phosphoprotein 3-like PATO:0000070 amount UBERON:0001977 blood serum https://orcid.org/0000-0001-8314-2140
OBA:2041765 level of RAB6-interacting golgin in blood serum PR:000008148 RAB6-interacting golgin PATO:0000070 amount UBERON:0001977 blood serum https://orcid.org/0000-0001-8314-2140
OBA:2041766 level of Golgi SNAP receptor complex member 1 in blood serum PR:000008151 Golgi SNAP receptor complex member 1 PATO:0000070 amount UBERON:0001977 blood serum https://orcid.org/0000-0001-8314-2140
OBA:2041767 level of aspartate aminotransferase, mitochondrial in blood serum PR:000008154 aspartate aminotransferase, mitochondrial PATO:0000070 amount UBERON:0001977 blood serum https://orcid.org/0000-0001-8314-2140
OBA:2041767 level of aspartate aminotransferase, mitochondrial in blood serum PR:000008154 aspartate aminotransferase, mitochondrial PATO:0000070 amount UBERON:0001977 blood serum serum aspartate aminotransferase level https://medlineplus.gov/lab-tests/ast-test/ https://orcid.org/0000-0001-8314-2140
OBA:2041768 level of glypican-1 in blood serum PR:000008163 glypican-1 PATO:0000070 amount UBERON:0001977 blood serum https://orcid.org/0000-0001-8314-2140
OBA:2041769 level of glypican-4 in blood serum PR:000008166 glypican-4 PATO:0000070 amount UBERON:0001977 blood serum https://orcid.org/0000-0001-8314-2140
OBA:2041770 level of glycerol-3-phosphate dehydrogenase [NAD(+)], cytoplasmic in blood serum PR:000008169 glycerol-3-phosphate dehydrogenase [NAD(+)], cytoplasmic PATO:0000070 amount UBERON:0001977 blood serum https://orcid.org/0000-0001-8314-2140
Expand Down Expand Up @@ -5418,7 +5418,6 @@ OBA:2045367 CD80 molecule level PR:000001438 CD80 molecule PATO:0000070 amount U
OBA:2045368 CD86 molecule level PR:000001412 CD86 molecule PATO:0000070 amount UBERON:0001062 anatomical entity t-lymphocyte activation antigen CD86 level https://orcid.org/0000-0001-8314-2140
OBA:2045369 troponin I, cardiac muscle level PR:000016506 troponin I, cardiac muscle PATO:0000070 amount UBERON:0001062 anatomical entity troponin i, cardiac muscle level https://orcid.org/0000-0001-8314-2140
OBA:2045370 glutathione peroxidase 2 level PR:000008211 glutathione peroxidase 2 PATO:0000070 amount UBERON:0001062 anatomical entity blood glutathione peroxidase level https://orcid.org/0000-0001-8314-2140
OBA:2045372 gestational blood glucose trait CHEBI:17234 glucose OBA:VT0000188 blood glucose amount UBERON:0009097 gravid organism https://orcid.org/0000-0001-8314-2140
OBA:2045373 red blood cell folate amount CHEBI:67011 folates PATO:0000070 amount CL:0000232 erythrocyte https://orcid.org/0000-0001-8314-2140
OBA:2045374 brain serotonin transporter level PR:000015189 sodium-dependent serotonin transporter PATO:0000070 amount UBERON:0000955 brain https://orcid.org/0000-0001-8314-2140
OBA:2045375 circulating cell free DNA level CHEBI:16991 deoxyribonucleic acid PATO:0000070 amount UBERON:0000178 blood https://orcid.org/0000-0001-8314-2140
Expand All @@ -5431,3 +5430,14 @@ OBA:2045384 plasma renin activity attribute PR:000013883 renin PATO:0001414 cata
OBA:2045385 thiopurine methyltransferase activity trait PR:000016583 thiopurine S-methyltransferase PATO:0001414 catalytic activity UBERON:0001062 anatomical entity https://orcid.org/0000-0001-8314-2140
OBA:2045386 response to milk UBERON:0001913 milk PATO:0000077 response to UBERON:0001062 anatomical entity milk allergy trait https://orcid.org/0000-0001-8314-2140
OBA:2045387 knee flexor muscle funcionality attribute UBERON:0000366 flexor muscle PATO:0001509 functionality UBERON:0001465 knee https://orcid.org/0000-0001-8314-2140
OBA:2045394 level of aspartate aminotransferase, cytoplasmic type in blood serum PR:000008153 aspartate aminotransferase, cytoplasmic PATO:0000070 amount UBERON:0001977 blood serum serum aspartate aminotransferase level https://medlineplus.gov/lab-tests/ast-test/ https://orcid.org/0000-0001-8314-2140
OBA:2045395 serum sodium level CHEBI:26708 sodium atom PATO:0000070 amount UBERON:0001977 blood serum https://orcid.org/0000-0001-8314-2140
OBA:2045396 serum glucose level CHEBI:17234 glucose PATO:0000070 amount UBERON:0001977 blood serum https://orcid.org/0000-0001-8314-2140
OBA:2045397 serum high-density lipoprotein cholesterol level CHEBI:47775 high-density lipoprotein cholesterol PATO:0000070 amount UBERON:0001977 blood serum serum HDL cholesterol level https://orcid.org/0000-0001-8314-2140
OBA:2045398 serum low-density lipoprotein cholesterol level CHEBI:47774 low-density lipoprotein cholesterol PATO:0000070 amount UBERON:0001977 blood serum serum LDL cholesterol level https://orcid.org/0000-0001-8314-2140
OBA:2045399 alanine aminotransferase level PR:000050219 alanine aminotransferase PATO:0000070 amount UBERON:0001062 anatomical entity https://orcid.org/0000-0001-8314-2140
OBA:2045400 level of aspartate aminotransferase, cytoplasmic type PR:000008153 aspartate aminotransferase, cytoplasmic PATO:0000070 amount UBERON:0001062 anatomical entity aspartate aminotransferase level https://orcid.org/0000-0001-8314-2140
OBA:2045401 level of aspartate aminotransferase, mitochondrial type PR:000008154 aspartate aminotransferase, mitochondrial PATO:0000070 amount UBERON:0001062 anatomical entity aspartate aminotransferase level https://orcid.org/0000-0001-8314-2140
OBA:2045402 creatinine level CHEBI:16737 creatinine PATO:0000070 amount UBERON:0001062 anatomical entity https://orcid.org/0000-0001-8314-2140
OBA:2045403 urobilinogen level CHEBI:29026 urobilinogen PATO:0000070 amount UBERON:0001062 anatomical entity https://orcid.org/0000-0001-8314-2140
OBA:2045404 nitrite level CHEBI:16301 nitrite PATO:0000070 amount UBERON:0001062 anatomical entity https://orcid.org/0000-0001-8314-2140

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