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Merge pull request #122 from edoapra/master
podman native build
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| Original file line number | Diff line number | Diff line change |
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| @@ -0,0 +1,185 @@ | ||
| name: nwchem_podman_build | ||
|
|
||
| on: | ||
| repository_dispatch: | ||
| types: [backend_automation] | ||
| workflow_dispatch: | ||
|
|
||
| jobs: | ||
| shifter_schedule: | ||
| if: (github.event_name == 'workflow_dispatch') || (github.event_name == 'schedule') | ||
| strategy: | ||
| fail-fast: false | ||
| matrix: | ||
| folder: | ||
| - nwchem-dev.mpipr.nersc_podman.mpich4 | ||
| branch: [ master, hotfix/release-7-2-0] | ||
| openmp: [ Y, N] | ||
| fc: [ gfortran] | ||
| armci_network: [ MPI-PR ] | ||
| include: | ||
| - folder: nwchem-dev.mpipr.nersc_podman.mpich4 | ||
| armci_network: MPI-PR | ||
| openmp: N | ||
| branch: master | ||
| fc: nvfortran | ||
| - folder: nwchem-dev.mpipr.nersc_podman.mpich4 | ||
| armci_network: MPI-PR | ||
| openmp: N | ||
| branch: release-7-2-0 | ||
| fc: nvfortran | ||
| runs-on: ubuntu-latest | ||
| steps: | ||
| - name: Checkout | ||
| uses: actions/checkout@v4 | ||
| - name: FC tag | ||
| id: fc-tag | ||
| run: | | ||
| if [[ ${{ matrix.fc }} == 'gfortran' ]]; then | ||
| echo "fc=" >> $GITHUB_ENV | ||
| else | ||
| echo "fc=$(echo .${{matrix.fc }} )" >> $GITHUB_ENV | ||
| fi | ||
| - name: cache key | ||
| run: | | ||
| echo "cache_key=${{ matrix.folder }}-${{ matrix.branch }}${{ env.fc }}-cache-v005" >> $GITHUB_ENV | ||
| - name: Setup cache | ||
| id: setup-cache | ||
| uses: actions/cache@v4 | ||
| with: | ||
| path: | | ||
| ~/cache | ||
| key: ${{ env.cache_key }} | ||
| - name: Login to GitHub Container Registry | ||
| if: ${{ github.actor == github.repository_owner }} | ||
| uses: docker/login-action@v3 | ||
| with: | ||
| registry: ghcr.io | ||
| username: ${{ github.actor }} | ||
| password: ${{ secrets.GITHUB_TOKEN }} | ||
| # username: ${{ secrets.DOCKERHUB_USERNAME }} | ||
| # password: ${{ secrets.DOCKERHUB_TOKEN }} | ||
| - name: fetch cache | ||
| if: (steps.setup-cache.outputs.cache-hit == 'true') | ||
| run: | | ||
| cd ${{ matrix.folder }} | ||
| ls -lrta | ||
| if [[ -f ~/cache/libext.tar.bz2 ]]; then \ | ||
| echo "libext cache present" ; \ | ||
| mkdir -p cache|| true ; \ | ||
| rsync -av ~/cache/libext* cache/. ; \ | ||
| echo "libext cache fetched" ; \ | ||
| fi | ||
| if [[ -f ~/cache/simint.tar.bz2 ]]; then \ | ||
| echo "simint cache present" ; \ | ||
| mkdir -p cache|| true ; \ | ||
| rsync -av ~/cache/simint* cache/. ; \ | ||
| echo "simint cache fetched" ; \ | ||
| fi | ||
| if [[ -f ~/cache/mpich.tar.bz2 ]]; then \ | ||
| echo "mpich cache present" ; \ | ||
| mkdir -p cache|| true ; \ | ||
| rsync -av ~/cache/mpich* cache/. ; \ | ||
| echo "mpich cache fetched" ; \ | ||
| ls -l cache/ ; \ | ||
| echo "======" ; \ | ||
| fi | ||
| - name: openmp tag | ||
| id: openmp-tag | ||
| run: | | ||
| if [[ ${{ matrix.openmp }} == 'N' ]]; then | ||
| echo "omp_tag=_no_openmp" >> $GITHUB_ENV | ||
| else | ||
| echo "omp_tag=" >> $GITHUB_ENV | ||
| fi | ||
| shell: bash | ||
| - name: armci_net tag | ||
| id: armci_net | ||
| run: | | ||
| echo "armci_net=.$(echo ${{ matrix.armci_network }} | tr '[:upper:]' '[:lower:]')" >> $GITHUB_ENV | ||
| shell: bash | ||
| - name: nwchem version tag | ||
| run: | | ||
| if [[ ${{ matrix.branch }} == master ]]; then | ||
| echo "longnwversion=$(echo ${{ matrix.folder }}| sed -e 's|.mpipr||')" >> $GITHUB_ENV | ||
| elif [[ ${{ matrix.branch }} == hotfix/release-7-2-0 ]]; then | ||
| echo "longnwversion=$(echo ${{ matrix.folder }} | sed -e 's|.mpipr||' | sed -e 's|dev|720|')" >> $GITHUB_ENV | ||
| else | ||
| echo "longnwversion=$(echo ${{ matrix.folder }} | sed -e 's|.mpipr||' | sed -e 's|dev|${{ matrix.branch }}|')" >> $GITHUB_ENV | ||
| fi | ||
| shell: bash | ||
| - name: docker tag | ||
| id: docker-tag | ||
| run: | | ||
| echo "tag=ghcr.io/${{ github.actor }}/${{ env.longnwversion}}${{ env.omp_tag }}${{ env.armci_net }}${{ env.fc }}" >> $GITHUB_ENV | ||
| shell: bash | ||
| - name: builddate | ||
| id: build-date | ||
| run: | | ||
| echo "date=$(TZ=America/Los_Angeles date +%Y%m%d_%H%M%S)" >> $GITHUB_ENV | ||
| - name: Install podman | ||
| run: | | ||
| sudo apt-get install -y podman | ||
| which podman | ||
| podman version | ||
| - name: build podman | ||
| run: | | ||
| cd ${{ matrix.folder }} | ||
| podman build \ | ||
| --build-arg FC=${{ matrix.fc }} \ | ||
| --build-arg USE_OPENMP_VALUE=${{ matrix.openmp }} \ | ||
| --build-arg NWCHEM_BRANCH=${{ matrix.branch}} \ | ||
| --build-arg ARMCI_NETWORK=${{ matrix.armci_network}} \ | ||
| --build-arg CACHE_HIT=${{ env.cache_hit }} \ | ||
| --build-arg GITHUB_REPOSITORY_OWNER=${{ github.repository_owner }} \ | ||
| --build-arg CUDA_VERSION_MAJOR=11 \ | ||
| --build-arg CUDA_VERSION_MINOR=7 \ | ||
| --format docker \ | ||
| -t ${{ env.tag }}:latest . | ||
| - name: push to ghcr.io | ||
| run: | | ||
| echo ${{ secrets.GITHUB_TOKEN }} | podman login -u ${{ github.actor }} --password-stdin ghcr.io | ||
| podman push ${{ env.tag }}:latest ${{ env.tag }}:${{ env.date }} | ||
| podman push ${{ env.tag }}:latest ${{ env.tag }}:latest | ||
| - name: load and test image | ||
| if: ( github.actor == github.repository_owner ) | ||
| run: | | ||
| sleep 30s | ||
| podman pull ${{ env.tag }} | ||
| export MYLDPATH=/usr/local/lib:/opt/lib | ||
| if [[ ${{ matrix.fc }} == nvfortran ]]; then | ||
| podman run -e LD_LIBRARY_PATH="$MYLDPATH" --entrypoint=ldd --rm \ | ||
| ${{ env.tag }} /opt/nwchem/bin/LINUX64/nwchem | ||
| else | ||
| cd /tmp | ||
| umask u=rwx,g=rwx,o=rwx | ||
| umask -S | ||
| git clone --no-checkout https://github.com/nwchemgit/nwchem | ||
| cd nwchem | ||
| git sparse-checkout init --cone | ||
| git sparse-checkout set QA | ||
| git checkout | ||
| cd QA | ||
| podman run --rm -e LD_LIBRARY_PATH="$MYLDPATH" \ | ||
| -e HWLOC_HIDE_ERRORS=2 -w /opt/nwchem/QA \ | ||
| -v `pwd`:/opt/nwchem/QA --entrypoint='/opt/nwchem/QA/runtests.mpi.unix' \ | ||
| ${{ env.tag }} \ | ||
| procs 2 h2o_opt prop_mep_gcube | ||
| fi | ||
| - name: store cache | ||
| if: ( github.actor == github.repository_owner ) | ||
| run: | | ||
| mkdir -p ~/cache/ | ||
| podman run --privileged --user 0 --rm \ | ||
| --entrypoint='/bin/cp' -v ~/cache:/data \ | ||
| ${{ env.tag }} \ | ||
| -rp /opt/nwchem/src/libext/libext.tar.bz2 /data/. || true | ||
| podman run --privileged --user 0 --rm \ | ||
| --entrypoint='/bin/cp' -v ~/cache:/data \ | ||
| ${{ env.tag }} \ | ||
| -rp /opt/nwchem/src/libext/simint.tar.bz2 /data/. || true | ||
| podman run --privileged --user 0 --rm \ | ||
| --entrypoint='/bin/cp' -v ~/cache:/data \ | ||
| ${{ env.tag }} \ | ||
| -rp /usr/local/mpich.tar.bz2 /data/. || true | ||
| ls -Ralrt ~/cache || true |
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