nwchem_docker #447
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name: nwchem_docker | |
on: | |
push: | |
pull_request: | |
release: | |
schedule: | |
- cron: '59 15 * * FRI' | |
repository_dispatch: | |
types: [backend_automation] | |
workflow_dispatch: | |
jobs: | |
changes: | |
if: | | |
!contains(github.event.head_commit.message, 'ci skip') && (github.event_name != 'workflow_dispatch') && (github.event_name != 'schedule') | |
runs-on: ubuntu-22.04 | |
outputs: | |
# Expose matched filters as job 'folders' output variable | |
folders: ${{ steps.filter.outputs.changes }} | |
change: ${{ steps.env_change.outputs.change }} | |
steps: | |
- uses: actions/checkout@v4 | |
- name: choose_dockerfile_filter | |
uses: dorny/paths-filter@v3 | |
id: filter | |
with: | |
base: ${{ github.ref }} | |
filters: | | |
nwchem-dev: 'nwchem-dev/*' | |
builddebs.buster: 'builddebs.buster/*' | |
- name: Echo change to env | |
id: env_change | |
run: | | |
echo " steps.filter.outputs.changes " ${{ steps.filter.outputs.changes }} | |
if [[ ${{ steps.filter.outputs.changes }} == '[]' ]]; then | |
echo "no change detected" | |
echo "change=no" >> $GITHUB_OUTPUT | |
else | |
echo "change detected" | |
echo "change=yes" >> $GITHUB_OUTPUT | |
fi | |
- name: echo_change | |
run: | | |
echo " env change is" `cat $GITHUB_OUTPUT ` | |
echo " steps.env_change.outputs.change is ${{ steps.env_change.outputs.change }}" | |
docker_filter: | |
needs: [changes] | |
if: ( needs.changes.outputs.change == 'yes') | |
strategy: | |
fail-fast: false | |
matrix: | |
folder: ["${{ fromJSON(needs.changes.outputs.folders) }}"] | |
archs: [linux/amd64, linux/arm64, linux/ppc64le, linux/arm/v7, linux/riscv64] | |
fc: [ gfortran, nvfortran] | |
branch: [ master, release-7-2-0] | |
exclude: | |
- {folder: nwchem-dev, archs: linux/riscv64, fc: nvfortran} | |
- {folder: nwchem-dev, archs: linux/ppc64le, fc: nvfortran} | |
- {folder: nwchem-dev, archs: linux/arm/v7, fc: nvfortran} | |
runs-on: ubuntu-latest | |
timeout-minutes: 420 | |
outputs: | |
tag: ${{ steps.env_tag.outputs.tag }} | |
tag_noarch: ${{ steps.env_tag_noarch.outputs.tag_noarch }} | |
steps: | |
- name: Checkout | |
uses: actions/checkout@v4 | |
- name: Setup cache | |
id: setup-cache | |
uses: actions/cache@v4 | |
with: | |
path: | | |
~/cache | |
key: ${{ matrix.folder}}-${{ matrix.fc}}/${{ matrix.archs}}-nwchemdockercache-v018 | |
- name: Qemu | |
uses: docker/setup-qemu-action@v3 | |
with: | |
image: tonistiigi/binfmt:qemu-v6.0.0-10 | |
platforms: ${{ matrix.archs }} | |
- name: Available platforms | |
run: echo ${{ steps.qemu.outputs.platforms }} | |
- name: Set up Docker Buildx | |
uses: docker/setup-buildx-action@v3 | |
with: | |
driver-opts: | | |
image=moby/buildkit:v0.11.6 | |
network=host | |
buildkitd-flags: --debug | |
- name: Login to GitHub Container Registry | |
if: ${{ github.actor == github.repository_owner }} | |
uses: docker/login-action@v3 | |
with: | |
registry: ghcr.io | |
username: ${{ github.actor }} | |
password: ${{ secrets.GITHUB_TOKEN }} | |
- name: Get Arch | |
id: get-arch | |
run: | | |
echo "arch=$(echo ${{matrix.archs }} | sed 's/linux//'|sed 's/\///g' )" >> $GITHUB_ENV | |
shell: bash | |
- name: FC tag | |
id: fc-tag | |
run: | | |
if [[ ${{ matrix.fc }} == 'gfortran' ]]; then | |
echo "fc=" >> $GITHUB_ENV | |
else | |
echo "fc=$(echo -${{matrix.fc }} )" >> $GITHUB_ENV | |
fi | |
shell: bash | |
- name: fetch cache | |
if: (steps.setup-cache.outputs.cache-hit == 'true') | |
run: | | |
cd ${{ matrix.folder }} | |
ls -lrta | |
if [[ -f ~/cache/libext.tar.bz2 ]]; then \ | |
echo "libext cache present" ; \ | |
mkdir -p cache|| true ; \ | |
rsync -av ~/cache/libext* cache/. ; \ | |
echo "libext cache fetched" ; \ | |
if [[ -f ~/cache/simint.tar.bz2 ]]; then \ | |
echo "simint cache present" ; \ | |
mkdir -p cache|| true ; \ | |
rsync -av ~/cache/simint* cache/. ; \ | |
echo "simint cache fetched" ; \ | |
fi | |
ls -l cache/ ; \ | |
echo "======" ; \ | |
fi | |
echo "cache_hit=Y" >> $GITHUB_ENV | |
- name: negative-cache-hit-reporter | |
if: (steps.setup-cache.outputs.cache-hit != 'true') | |
run: | | |
echo "cache_hit=N" >> $GITHUB_ENV | |
- name: nwchem version tag | |
run: | | |
if [[ ${{ matrix.branch }} == master ]]; then | |
echo "nwversion=dev" >> $GITHUB_ENV | |
elif [[ ${{ matrix.branch }} == release-7-2-0 ]]; then | |
echo "nwversion=720" >> $GITHUB_ENV | |
else | |
echo "nwversion=unknown" >> $GITHUB_ENV | |
fi | |
shell: bash | |
- name: docker tag noarch | |
run: | | |
echo "tag_noarch=ghcr.io/${{ github.actor }}/nwchem-${{ env.nwversion }}${{ env.fc }}" >> $GITHUB_ENV | |
shell: bash | |
- name: docker tag | |
run: | | |
echo "tag=${{ env.tag_noarch }}:${{ env.arch }}" >> $GITHUB_ENV | |
shell: bash | |
- name: echo docker tag to env | |
id: env_tag | |
run: | |
echo "tag=${{ env.tag }}" >> $GITHUB_OUTPUT | |
- name: echo docker tag_noarch to env | |
id: env_tag_noarch | |
run: | |
echo "tag_noarch=${{ env.tag_noarch }}" >> $GITHUB_OUTPUT | |
- name: build date | |
id: build-date | |
run: | | |
echo "date=$(TZ=America/Los_Angeles date +%Y%m%d_%H%M%S)" >> $GITHUB_ENV | |
- name: build_filter | |
uses: docker/build-push-action@v6 | |
with: | |
push: ${{ github.actor == github.repository_owner }} | |
provenance: false | |
context: ${{ matrix.folder }} | |
shm-size: 256m | |
platforms: ${{ matrix.archs }} | |
tags: | | |
${{ env.tag }} | |
${{ env.tag }}-${{ env.date }} | |
build-args: | | |
FC=${{ matrix.fc }} | |
NWCHEM_BRANCH=${{ matrix.branch }} | |
CACHE_HIT=${{ env.cache_hit }} | |
GITHUB_REPOSITORY_OWNER=${{ github.repository_owner }} | |
- name: load and test image | |
if: ( github.actor == github.repository_owner ) | |
run: | | |
sleep 30s | |
docker pull ${{ env.tag }} | |
cd /tmp | |
umask u=rwx,g=rwx,o=rwx | |
umask -S | |
git clone --no-checkout https://github.com/nwchemgit/nwchem | |
cd nwchem | |
git sparse-checkout init --cone | |
git sparse-checkout set QA | |
git checkout | |
cd QA | |
if [[ ${{ matrix.archs }} != 'linux/arm/v7' && ${{ matrix.fc }} != 'nvfortran' ]]; then \ | |
docker run --shm-size 256m --rm --platform ${{matrix.archs }} \ | |
-e NWCHEM_EXECUTABLE=/opt/nwchem/bin/nwchem --entrypoint='/opt/nwchem/QA/runtests.mpi.unix' \ | |
-w /opt/nwchem/QA -v `pwd`:/opt/nwchem/QA \ | |
${{ env.tag }} \ | |
dft_he2+ ;\ | |
fi | |
- name: store cache | |
if: ( github.actor == github.repository_owner ) | |
run: | | |
mkdir -p ~/cache/ | |
docker run --privileged --user 0 --rm --platform ${{matrix.archs }} \ | |
--entrypoint='/bin/cp' -v ~/cache:/data \ | |
${{ env.tag }} \ | |
-rp /opt/nwchem/src/libext/libext.tar.bz2 /data/. || true | |
ls -Ralrt ~/cache || true | |
bundle_images1: | |
needs: [changes, docker_filter] | |
uses: ./.github/workflows/docker_manifest.yml | |
secrets: | |
inherit | |
docker_schedule: | |
if: (github.event_name == 'workflow_dispatch') || (github.event_name == 'schedule') | |
strategy: | |
fail-fast: false | |
matrix: | |
folder: | |
- nwchem-dev | |
archs: [linux/amd64, linux/arm64, linux/ppc64le, linux/arm/v7, linux/riscv64] | |
fc: [ gfortran, nvfortran] | |
branch: [ master, release-7-2-0] | |
exclude: | |
- {folder: nwchem-dev, archs: linux/riscv64, fc: nvfortran} | |
- {folder: nwchem-dev, archs: linux/ppc64le, fc: nvfortran} | |
- {folder: nwchem-dev, archs: linux/arm/v7, fc: nvfortran} | |
runs-on: ubuntu-latest | |
timeout-minutes: 420 | |
outputs: | |
tag: ${{ steps.env_tag.outputs.tag }} | |
tag_noarch: ${{ steps.env_tag_noarch.outputs.tag_noarch }} | |
steps: | |
- name: Checkout | |
uses: actions/checkout@v4 | |
- name: Setup cache | |
id: setup-cache | |
uses: actions/cache@v4 | |
with: | |
path: | | |
~/cache | |
key: ${{ matrix.folder}}-${{ matrix.fc}}/${{ matrix.archs}}-nwchemdockercache-v018 | |
- name: Qemu | |
id: qemu | |
uses: docker/setup-qemu-action@v3 | |
with: | |
image: tonistiigi/binfmt:qemu-v6.0.0-10 | |
platforms: ${{ matrix.archs }} | |
- name: Available platforms | |
run: echo ${{ steps.qemu.outputs.platforms }} | |
- name: Set up Docker Buildx | |
uses: docker/setup-buildx-action@v3 | |
with: | |
driver-opts: | | |
image=moby/buildkit:v0.11.6 | |
network=host | |
buildkitd-flags: --debug | |
- name: Login to GitHub Container Registry | |
if: ${{ github.actor == github.repository_owner }} | |
uses: docker/login-action@v3 | |
with: | |
registry: ghcr.io | |
username: ${{ github.actor }} | |
password: ${{ secrets.GITHUB_TOKEN }} | |
- name: Get Arch | |
id: get-arch | |
run: | | |
echo "arch=$(echo ${{matrix.archs }} | sed 's/linux//'|sed 's/\///g' )" >> $GITHUB_ENV | |
shell: bash | |
- name: FC tag | |
id: fc-tag | |
run: | | |
if [[ ${{ matrix.fc }} == 'gfortran' ]]; then | |
echo "fc=" >> $GITHUB_ENV | |
else | |
echo "fc=$(echo -${{matrix.fc }} )" >> $GITHUB_ENV | |
fi | |
shell: bash | |
- name: fetch cache | |
if: (steps.setup-cache.outputs.cache-hit == 'true') | |
run: | | |
cd ${{ matrix.folder }} | |
ls -lrta | |
if [[ -f ~/cache/libext.tar.bz2 ]]; then \ | |
echo "libext cache present" ; \ | |
mkdir -p cache|| true ; \ | |
rsync -av ~/cache/libext* cache/. ; \ | |
echo "libext cache fetched" ; \ | |
ls -l cache/ ; \ | |
echo "======" ; \ | |
fi | |
echo "cache_hit=Y" >> $GITHUB_ENV | |
- name: negative-cache-hit-reporter | |
if: (steps.setup-cache.outputs.cache-hit != 'true') | |
run: | | |
echo "cache_hit=N" >> $GITHUB_ENV | |
- name: nwchem version tag | |
run: | | |
if [[ ${{ matrix.branch }} == master ]]; then | |
echo "nwversion=dev" >> $GITHUB_ENV | |
else | |
echo "nwversion=720" >> $GITHUB_ENV | |
fi | |
shell: bash | |
- name: docker tag noarch | |
run: | | |
echo "tag_noarch=ghcr.io/${{ github.actor }}/nwchem-${{ env.nwversion }}${{ env.fc }}" >> $GITHUB_ENV | |
shell: bash | |
- name: docker tag | |
run: | | |
echo "tag=${{ env.tag_noarch }}:${{ env.arch }}" >> $GITHUB_ENV | |
shell: bash | |
- name: echo docker tag to env | |
id: env_tag | |
run: | |
echo "tag=${{ env.tag }}" >> $GITHUB_OUTPUT | |
- name: echo docker tag_noarch to env | |
id: env_tag_noarch | |
run: | |
echo "tag_noarch=${{ env.tag_noarch }}" >> $GITHUB_OUTPUT | |
- name: build date | |
id: build-date | |
run: | | |
echo "date=$(TZ=America/Los_Angeles date +%Y%m%d_%H%M%S)" >> $GITHUB_ENV | |
- name: print env | |
run: | | |
echo "GITHUB_ENV" `cat $GITHUB_ENV` | |
echo " tag " ${{ env.tag }} | |
- name: build_schedule | |
uses: docker/build-push-action@v6 | |
with: | |
push: ${{ github.actor == github.repository_owner }} | |
provenance: false | |
context: ${{ matrix.folder }} | |
shm-size: 256m | |
platforms: ${{ matrix.archs }} | |
tags: | | |
${{ env.tag }} | |
${{ env.tag }}-${{ env.date }} | |
build-args: | | |
FC=${{ matrix.fc }} | |
NWCHEM_BRANCH=${{ matrix.branch }} | |
CACHE_HIT=${{ env.cache_hit }} | |
GITHUB_REPOSITORY_OWNER=${{ github.repository_owner }} | |
- name: load and test image | |
if: ( github.actor == github.repository_owner ) | |
run: | | |
sleep 30s | |
docker pull ${{ env.tag }} | |
cd /tmp | |
umask u=rwx,g=rwx,o=rwx | |
umask -S | |
git clone --no-checkout https://github.com/nwchemgit/nwchem | |
cd nwchem | |
git sparse-checkout init --cone | |
git sparse-checkout set QA | |
git checkout | |
cd QA | |
if [[ ${{ matrix.archs }} != 'linux/arm/v7' && ${{ matrix.fc }} != 'nvfortran' ]]; then \ | |
docker run --shm-size 256m --rm --platform ${{matrix.archs }} \ | |
-e NWCHEM_EXECUTABLE=/opt/nwchem/bin/nwchem --entrypoint='/opt/nwchem/QA/runtests.mpi.unix' \ | |
-w /opt/nwchem/QA -v `pwd`:/opt/nwchem/QA \ | |
${{ env.tag }} \ | |
dft_he2+ ;\ | |
fi | |
- name: store cache | |
if: ( github.actor == github.repository_owner ) | |
run: | | |
mkdir -p ~/cache/ | |
docker run --privileged --user 0 --rm --platform ${{matrix.archs }} \ | |
--entrypoint='/bin/cp' -v ~/cache:/data \ | |
${{ env.tag }} \ | |
-rp /opt/nwchem/src/libext/libext.tar.bz2 /data/. || true | |
docker run --privileged --user 0 --rm --platform ${{matrix.archs }} \ | |
--entrypoint='/bin/cp' -v ~/cache:/data \ | |
${{ env.tag }} \ | |
-rp /opt/nwchem/src/libext/simint.tar.bz2 /data/. || true | |
ls -Ralrt ~/cache || true | |
bundle_images2: | |
needs: [docker_schedule] | |
uses: ./.github/workflows/docker_manifest.yml | |
secrets: | |
inherit |