Merge pull request #91 from nutriverse/dev

edit pkgdown.yml; fix #89; fix #90; fix #88

.github/workflows/test-coverage.yaml

@@ -13,6 +13,7 @@ jobs:
     runs-on: ubuntu-latest
     env:
       GITHUB_PAT: ${{ secrets.GITHUB_TOKEN }}
+      CODECOV_TOKEN: ${{ secrets.CODECOV_TOKEN }}
 
     steps:
       - uses: actions/checkout@v4

DESCRIPTION

@@ -31,11 +31,12 @@ Suggests:
     tufte,
     spelling,
     covr,
-    kableExtra
+    kableExtra,
+    bbw
 Encoding: UTF-8
 Language: en-GB
 LazyData: true
-RoxygenNote: 7.3.1
+RoxygenNote: 7.3.2
 Roxygen: list(markdown = TRUE)
 URL: https://nutriverse.io/nipnTK/, https://github.com/nutriverse/nipnTK
 BugReports: https://github.com/nutriverse/nipnTK/issues

pkgdown/_pkgdown.yml

@@ -7,24 +7,26 @@ development:
 
 template:
   bootstrap: 5
-  bootswatch: cosmo
-  theme: pygments #haddock
-  ganalytics: G-HD17FR1JE1
+  bootswatch: pulse
+  theme: breeze-light
+  ganalytics: G-51ZQ0EXXM4
+  bslib:
+    pkgdown-nav-height: 100px
 
 navbar:
   bg: success
   type: light
   structure:
     left:  [home, intro, reference, articles, news]
-    right: [mastodon, linkedin, github]
+    right: [search, mastodon, github]
 
   components:
     articles:
       text: Articles
       menu:
       - text: Check ranges and legal values
         href: articles/rl.html
-      - text: Identify outliers using scatterplots
+      - text: Identify outliers using scatter plots
         href: articles/sp.html
       - text: Identify outliers using flags
         href: articles/flagging.html
@@ -40,15 +42,9 @@ navbar:
         href: articles/as.html
     mastodon:
       icon: fab fa-mastodon fa-lg
-      href: https://fosstodon.org/@katilingban
-    linkedin:
-      icon: fab fa-linkedin fa-lg
-      href: https://www.linkedin.com/company/katilingban/
+      href: https://mastodon.social/@nutriverse
 
 home:
-  sidebar:
-    structure: [links, license, community, citation, authors, dev]
-
   links:
   - text: Read more about NiPN
     href: https://www.nipn-nutrition-platforms.org
@@ -63,7 +59,7 @@ reference:
     - outliersUV
     - rl.ex01
 
-  - title: Using scatterplots to identify outliers
+  - title: Using scatter plots to identify outliers
     contents:
     - outliersMD
     - sp.ex01