Merge pull request #18 from nlmixr2/14-monolix2rx-new

14 monolix2rx new

CRAN-SUBMISSION

@@ -1,3 +1,3 @@
-Version: 0.0.1
-Date: 2024-09-18 17:04:52 UTC
-SHA: 2a9908797f2eddda3499df6f904aed5413829eb0
+Version: 0.0.2
+Date: 2024-09-20 17:23:09 UTC
+SHA: 50a6d133e91e263750f7208c21c5cfc094ff5d07

DESCRIPTION

@@ -1,15 +1,14 @@
 Package: monolix2rx
 Title: Converts 'Monolix' Models to 'rxode2'
-Version: 0.0.1
+Version: 0.0.2.9000
 Authors@R:
    c(person("Matthew","Fidler", role = c("aut", "cre"), email = "[email protected]", comment=c(ORCID="0000-0001-8538-6691")),
      person("Justin", "Wilkins", role = "ctb", email = "[email protected]", comment=c(ORCID="0000-0002-7099-9396")))
 Description: 'Monolix' is a tool for running mixed effects model using
     'saem'. This tool allows you to convert 'Monolix' models to 'rxode2'
     (Wang, Hallow and James (2016) <doi:10.1002/psp4.12052>) using the
     form compatible with 'nlmixr2' (Fidler et al (2019) <doi:10.1002/psp4.12445>).
-    The 'nlmixr2' syntax requires the residual specification to be included and it
-    is not always translated. If available, the 'rxode2' model will
+    If available, the 'rxode2' model will
     read in the 'Monolix' data and compare the simulation for the
     population model individual model and residual
     model to immediately show how well the translation is
@@ -26,12 +25,13 @@ Description: 'Monolix' is a tool for running mixed effects model using
   instead manually setting up text files (which only works with old versions of
   'Monolix').
 License: MIT + file LICENSE
+URL: https://nlmixr2.github.io/monolix2rx/, https://github.com/nlmixr2/monolix2rx/
 Encoding: UTF-8
 Roxygen: list(markdown = TRUE)
 RoxygenNote: 7.3.2
 LinkingTo:
     dparser,
-    rxode2parse,
+    rxode2,
     Rcpp
 Imports:
     Rcpp,

NEWS.md

@@ -1,3 +1,14 @@
+# monolix2rx (development version)
+
+# monolix2rx 0.0.2
+
+* Remove `rxode2parse` `LinkingTo`
+
+* Add urls for website
+
+* Remove sentence about the residual specification not always being
+  captured.  Right now for 'Monolix' it always is.
+
 # monolix2rx 0.0.1
 
 * Initial CRAN submission.

cran-comments.md

@@ -1,21 +1 @@
-- Please do not start the title with the package name.
-
-  - Fixed; removed package name from the title since it is redundant
-
-- Please proofread your DESCRIPTION.
-
-  - It currently reads: "...to load its model library instead manually setting up text
-   files (...). command line usage."
-
-   - I believe it should be: "...to load its model library instead of
-     manually setting up text files (...)."
-
- - Fixed.
-
-Please fix and resubmit.
-
-## R CMD check results
-
-0 errors | 0 warnings | 1 note
-
-* This is a new release.
+- Remove `rxode2parse` `LinkingTo`