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docs(master): Update docs of development line
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4 changes: 2 additions & 2 deletions master/.buildinfo
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# Sphinx build info version 1
# This file hashes the configuration used when building these files. When it is not found, a full rebuild will be done.
config: 1c9a38b022a46ab6de8eaf733ab1d9a2
# This file records the configuration used when building these files. When it is not found, a full rebuild will be done.
config: 8860b78311a1eea7bbf1db3c58829ef9
tags: 645f666f9bcd5a90fca523b33c5a78b7
264 changes: 147 additions & 117 deletions master/_modules/sdcflows/data.html → master/_modules/acres.html

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8 changes: 4 additions & 4 deletions master/_modules/index.html
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<meta name="viewport" content="width=device-width,initial-scale=1"/>
<meta name="color-scheme" content="light dark"><link rel="index" title="Index" href="../genindex.html" /><link rel="search" title="Search" href="../search.html" />

<!-- Generated with Sphinx 8.0.2 and Furo 2024.08.06 -->
<!-- Generated with Sphinx 8.1.3 and Furo 2024.08.06 -->
<title>Overview: module code - sdcflows 0+unknown documentation</title>
<link rel="stylesheet" type="text/css" href="../_static/pygments.css?v=a746c00c" />
<link rel="stylesheet" type="text/css" href="../_static/styles/furo.css?v=354aac6f" />
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</div>
<article role="main" id="furo-main-content">
<h1>All modules for which code is available</h1>
<ul><li><a href="sdcflows/cli/main.html">sdcflows.cli.main</a></li>
<ul><li><a href="acres.html">acres</a></li>
<li><a href="sdcflows/cli/main.html">sdcflows.cli.main</a></li>
<li><a href="sdcflows/cli/parser.html">sdcflows.cli.parser</a></li>
<li><a href="sdcflows/cli/workflow.html">sdcflows.cli.workflow</a></li>
<li><a href="sdcflows/config.html">sdcflows.config</a></li>
<li><a href="sdcflows/data.html">sdcflows.data</a></li>
<li><a href="sdcflows/fieldmaps.html">sdcflows.fieldmaps</a></li>
<li><a href="sdcflows/interfaces/brainmask.html">sdcflows.interfaces.brainmask</a></li>
<li><a href="sdcflows/interfaces/bspline.html">sdcflows.interfaces.bspline</a></li>
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</aside>
</div>
</div><script src="../_static/documentation_options.js?v=27db1736"></script>
<script src="../_static/doctools.js?v=9a2dae69"></script>
<script src="../_static/doctools.js?v=9bcbadda"></script>
<script src="../_static/sphinx_highlight.js?v=dc90522c"></script>
<script src="../_static/scripts/furo.js?v=5fa4622c"></script>
<script crossorigin="anonymous" integrity="sha256-Ae2Vz/4ePdIu6ZyI/5ZGsYnb+m0JlOmKPjt6XZ9JJkA=" src="https://cdnjs.cloudflare.com/ajax/libs/require.js/2.3.4/require.min.js"></script>
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4 changes: 2 additions & 2 deletions master/_modules/sdcflows/cli/main.html
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<meta name="viewport" content="width=device-width,initial-scale=1"/>
<meta name="color-scheme" content="light dark"><link rel="index" title="Index" href="../../../genindex.html" /><link rel="search" title="Search" href="../../../search.html" />

<!-- Generated with Sphinx 8.0.2 and Furo 2024.08.06 -->
<!-- Generated with Sphinx 8.1.3 and Furo 2024.08.06 -->
<title>sdcflows.cli.main - sdcflows 0+unknown documentation</title>
<link rel="stylesheet" type="text/css" href="../../../_static/pygments.css?v=a746c00c" />
<link rel="stylesheet" type="text/css" href="../../../_static/styles/furo.css?v=354aac6f" />
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</aside>
</div>
</div><script src="../../../_static/documentation_options.js?v=27db1736"></script>
<script src="../../../_static/doctools.js?v=9a2dae69"></script>
<script src="../../../_static/doctools.js?v=9bcbadda"></script>
<script src="../../../_static/sphinx_highlight.js?v=dc90522c"></script>
<script src="../../../_static/scripts/furo.js?v=5fa4622c"></script>
<script crossorigin="anonymous" integrity="sha256-Ae2Vz/4ePdIu6ZyI/5ZGsYnb+m0JlOmKPjt6XZ9JJkA=" src="https://cdnjs.cloudflare.com/ajax/libs/require.js/2.3.4/require.min.js"></script>
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4 changes: 2 additions & 2 deletions master/_modules/sdcflows/cli/parser.html
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<meta name="viewport" content="width=device-width,initial-scale=1"/>
<meta name="color-scheme" content="light dark"><link rel="index" title="Index" href="../../../genindex.html" /><link rel="search" title="Search" href="../../../search.html" />

<!-- Generated with Sphinx 8.0.2 and Furo 2024.08.06 -->
<!-- Generated with Sphinx 8.1.3 and Furo 2024.08.06 -->
<title>sdcflows.cli.parser - sdcflows 0+unknown documentation</title>
<link rel="stylesheet" type="text/css" href="../../../_static/pygments.css?v=a746c00c" />
<link rel="stylesheet" type="text/css" href="../../../_static/styles/furo.css?v=354aac6f" />
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</aside>
</div>
</div><script src="../../../_static/documentation_options.js?v=27db1736"></script>
<script src="../../../_static/doctools.js?v=9a2dae69"></script>
<script src="../../../_static/doctools.js?v=9bcbadda"></script>
<script src="../../../_static/sphinx_highlight.js?v=dc90522c"></script>
<script src="../../../_static/scripts/furo.js?v=5fa4622c"></script>
<script crossorigin="anonymous" integrity="sha256-Ae2Vz/4ePdIu6ZyI/5ZGsYnb+m0JlOmKPjt6XZ9JJkA=" src="https://cdnjs.cloudflare.com/ajax/libs/require.js/2.3.4/require.min.js"></script>
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<meta name="viewport" content="width=device-width,initial-scale=1"/>
<meta name="color-scheme" content="light dark"><link rel="index" title="Index" href="../../../genindex.html" /><link rel="search" title="Search" href="../../../search.html" />

<!-- Generated with Sphinx 8.0.2 and Furo 2024.08.06 -->
<!-- Generated with Sphinx 8.1.3 and Furo 2024.08.06 -->
<title>sdcflows.cli.workflow - sdcflows 0+unknown documentation</title>
<link rel="stylesheet" type="text/css" href="../../../_static/pygments.css?v=a746c00c" />
<link rel="stylesheet" type="text/css" href="../../../_static/styles/furo.css?v=354aac6f" />
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</aside>
</div>
</div><script src="../../../_static/documentation_options.js?v=27db1736"></script>
<script src="../../../_static/doctools.js?v=9a2dae69"></script>
<script src="../../../_static/doctools.js?v=9bcbadda"></script>
<script src="../../../_static/sphinx_highlight.js?v=dc90522c"></script>
<script src="../../../_static/scripts/furo.js?v=5fa4622c"></script>
<script crossorigin="anonymous" integrity="sha256-Ae2Vz/4ePdIu6ZyI/5ZGsYnb+m0JlOmKPjt6XZ9JJkA=" src="https://cdnjs.cloudflare.com/ajax/libs/require.js/2.3.4/require.min.js"></script>
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4 changes: 2 additions & 2 deletions master/_modules/sdcflows/config.html
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<meta name="viewport" content="width=device-width,initial-scale=1"/>
<meta name="color-scheme" content="light dark"><link rel="index" title="Index" href="../../genindex.html" /><link rel="search" title="Search" href="../../search.html" />

<!-- Generated with Sphinx 8.0.2 and Furo 2024.08.06 -->
<!-- Generated with Sphinx 8.1.3 and Furo 2024.08.06 -->
<title>sdcflows.config - sdcflows 0+unknown documentation</title>
<link rel="stylesheet" type="text/css" href="../../_static/pygments.css?v=a746c00c" />
<link rel="stylesheet" type="text/css" href="../../_static/styles/furo.css?v=354aac6f" />
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</aside>
</div>
</div><script src="../../_static/documentation_options.js?v=27db1736"></script>
<script src="../../_static/doctools.js?v=9a2dae69"></script>
<script src="../../_static/doctools.js?v=9bcbadda"></script>
<script src="../../_static/sphinx_highlight.js?v=dc90522c"></script>
<script src="../../_static/scripts/furo.js?v=5fa4622c"></script>
<script crossorigin="anonymous" integrity="sha256-Ae2Vz/4ePdIu6ZyI/5ZGsYnb+m0JlOmKPjt6XZ9JJkA=" src="https://cdnjs.cloudflare.com/ajax/libs/require.js/2.3.4/require.min.js"></script>
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4 changes: 2 additions & 2 deletions master/_modules/sdcflows/fieldmaps.html
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<meta name="viewport" content="width=device-width,initial-scale=1"/>
<meta name="color-scheme" content="light dark"><link rel="index" title="Index" href="../../genindex.html" /><link rel="search" title="Search" href="../../search.html" />

<!-- Generated with Sphinx 8.0.2 and Furo 2024.08.06 -->
<!-- Generated with Sphinx 8.1.3 and Furo 2024.08.06 -->
<title>sdcflows.fieldmaps - sdcflows 0+unknown documentation</title>
<link rel="stylesheet" type="text/css" href="../../_static/pygments.css?v=a746c00c" />
<link rel="stylesheet" type="text/css" href="../../_static/styles/furo.css?v=354aac6f" />
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</aside>
</div>
</div><script src="../../_static/documentation_options.js?v=27db1736"></script>
<script src="../../_static/doctools.js?v=9a2dae69"></script>
<script src="../../_static/doctools.js?v=9bcbadda"></script>
<script src="../../_static/sphinx_highlight.js?v=dc90522c"></script>
<script src="../../_static/scripts/furo.js?v=5fa4622c"></script>
<script crossorigin="anonymous" integrity="sha256-Ae2Vz/4ePdIu6ZyI/5ZGsYnb+m0JlOmKPjt6XZ9JJkA=" src="https://cdnjs.cloudflare.com/ajax/libs/require.js/2.3.4/require.min.js"></script>
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4 changes: 2 additions & 2 deletions master/_modules/sdcflows/interfaces/brainmask.html
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<meta name="viewport" content="width=device-width,initial-scale=1"/>
<meta name="color-scheme" content="light dark"><link rel="index" title="Index" href="../../../genindex.html" /><link rel="search" title="Search" href="../../../search.html" />

<!-- Generated with Sphinx 8.0.2 and Furo 2024.08.06 -->
<!-- Generated with Sphinx 8.1.3 and Furo 2024.08.06 -->
<title>sdcflows.interfaces.brainmask - sdcflows 0+unknown documentation</title>
<link rel="stylesheet" type="text/css" href="../../../_static/pygments.css?v=a746c00c" />
<link rel="stylesheet" type="text/css" href="../../../_static/styles/furo.css?v=354aac6f" />
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</aside>
</div>
</div><script src="../../../_static/documentation_options.js?v=27db1736"></script>
<script src="../../../_static/doctools.js?v=9a2dae69"></script>
<script src="../../../_static/doctools.js?v=9bcbadda"></script>
<script src="../../../_static/sphinx_highlight.js?v=dc90522c"></script>
<script src="../../../_static/scripts/furo.js?v=5fa4622c"></script>
<script crossorigin="anonymous" integrity="sha256-Ae2Vz/4ePdIu6ZyI/5ZGsYnb+m0JlOmKPjt6XZ9JJkA=" src="https://cdnjs.cloudflare.com/ajax/libs/require.js/2.3.4/require.min.js"></script>
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4 changes: 2 additions & 2 deletions master/_modules/sdcflows/interfaces/bspline.html
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<meta name="viewport" content="width=device-width,initial-scale=1"/>
<meta name="color-scheme" content="light dark"><link rel="index" title="Index" href="../../../genindex.html" /><link rel="search" title="Search" href="../../../search.html" />

<!-- Generated with Sphinx 8.0.2 and Furo 2024.08.06 -->
<!-- Generated with Sphinx 8.1.3 and Furo 2024.08.06 -->
<title>sdcflows.interfaces.bspline - sdcflows 0+unknown documentation</title>
<link rel="stylesheet" type="text/css" href="../../../_static/pygments.css?v=a746c00c" />
<link rel="stylesheet" type="text/css" href="../../../_static/styles/furo.css?v=354aac6f" />
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</aside>
</div>
</div><script src="../../../_static/documentation_options.js?v=27db1736"></script>
<script src="../../../_static/doctools.js?v=9a2dae69"></script>
<script src="../../../_static/doctools.js?v=9bcbadda"></script>
<script src="../../../_static/sphinx_highlight.js?v=dc90522c"></script>
<script src="../../../_static/scripts/furo.js?v=5fa4622c"></script>
<script crossorigin="anonymous" integrity="sha256-Ae2Vz/4ePdIu6ZyI/5ZGsYnb+m0JlOmKPjt6XZ9JJkA=" src="https://cdnjs.cloudflare.com/ajax/libs/require.js/2.3.4/require.min.js"></script>
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4 changes: 2 additions & 2 deletions master/_modules/sdcflows/interfaces/epi.html
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<meta name="viewport" content="width=device-width,initial-scale=1"/>
<meta name="color-scheme" content="light dark"><link rel="index" title="Index" href="../../../genindex.html" /><link rel="search" title="Search" href="../../../search.html" />

<!-- Generated with Sphinx 8.0.2 and Furo 2024.08.06 -->
<!-- Generated with Sphinx 8.1.3 and Furo 2024.08.06 -->
<title>sdcflows.interfaces.epi - sdcflows 0+unknown documentation</title>
<link rel="stylesheet" type="text/css" href="../../../_static/pygments.css?v=a746c00c" />
<link rel="stylesheet" type="text/css" href="../../../_static/styles/furo.css?v=354aac6f" />
Expand Down Expand Up @@ -485,7 +485,7 @@ <h1>Source code for sdcflows.interfaces.epi</h1><div class="highlight"><pre>
</aside>
</div>
</div><script src="../../../_static/documentation_options.js?v=27db1736"></script>
<script src="../../../_static/doctools.js?v=9a2dae69"></script>
<script src="../../../_static/doctools.js?v=9bcbadda"></script>
<script src="../../../_static/sphinx_highlight.js?v=dc90522c"></script>
<script src="../../../_static/scripts/furo.js?v=5fa4622c"></script>
<script crossorigin="anonymous" integrity="sha256-Ae2Vz/4ePdIu6ZyI/5ZGsYnb+m0JlOmKPjt6XZ9JJkA=" src="https://cdnjs.cloudflare.com/ajax/libs/require.js/2.3.4/require.min.js"></script>
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4 changes: 2 additions & 2 deletions master/_modules/sdcflows/interfaces/fmap.html
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<meta name="viewport" content="width=device-width,initial-scale=1"/>
<meta name="color-scheme" content="light dark"><link rel="index" title="Index" href="../../../genindex.html" /><link rel="search" title="Search" href="../../../search.html" />

<!-- Generated with Sphinx 8.0.2 and Furo 2024.08.06 -->
<!-- Generated with Sphinx 8.1.3 and Furo 2024.08.06 -->
<title>sdcflows.interfaces.fmap - sdcflows 0+unknown documentation</title>
<link rel="stylesheet" type="text/css" href="../../../_static/pygments.css?v=a746c00c" />
<link rel="stylesheet" type="text/css" href="../../../_static/styles/furo.css?v=354aac6f" />
Expand Down Expand Up @@ -748,7 +748,7 @@ <h1>Source code for sdcflows.interfaces.fmap</h1><div class="highlight"><pre>
</aside>
</div>
</div><script src="../../../_static/documentation_options.js?v=27db1736"></script>
<script src="../../../_static/doctools.js?v=9a2dae69"></script>
<script src="../../../_static/doctools.js?v=9bcbadda"></script>
<script src="../../../_static/sphinx_highlight.js?v=dc90522c"></script>
<script src="../../../_static/scripts/furo.js?v=5fa4622c"></script>
<script crossorigin="anonymous" integrity="sha256-Ae2Vz/4ePdIu6ZyI/5ZGsYnb+m0JlOmKPjt6XZ9JJkA=" src="https://cdnjs.cloudflare.com/ajax/libs/require.js/2.3.4/require.min.js"></script>
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4 changes: 2 additions & 2 deletions master/_modules/sdcflows/interfaces/reportlets.html
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<meta name="viewport" content="width=device-width,initial-scale=1"/>
<meta name="color-scheme" content="light dark"><link rel="index" title="Index" href="../../../genindex.html" /><link rel="search" title="Search" href="../../../search.html" />

<!-- Generated with Sphinx 8.0.2 and Furo 2024.08.06 -->
<!-- Generated with Sphinx 8.1.3 and Furo 2024.08.06 -->
<title>sdcflows.interfaces.reportlets - sdcflows 0+unknown documentation</title>
<link rel="stylesheet" type="text/css" href="../../../_static/pygments.css?v=a746c00c" />
<link rel="stylesheet" type="text/css" href="../../../_static/styles/furo.css?v=354aac6f" />
Expand Down Expand Up @@ -488,7 +488,7 @@ <h1>Source code for sdcflows.interfaces.reportlets</h1><div class="highlight"><p
</aside>
</div>
</div><script src="../../../_static/documentation_options.js?v=27db1736"></script>
<script src="../../../_static/doctools.js?v=9a2dae69"></script>
<script src="../../../_static/doctools.js?v=9bcbadda"></script>
<script src="../../../_static/sphinx_highlight.js?v=dc90522c"></script>
<script src="../../../_static/scripts/furo.js?v=5fa4622c"></script>
<script crossorigin="anonymous" integrity="sha256-Ae2Vz/4ePdIu6ZyI/5ZGsYnb+m0JlOmKPjt6XZ9JJkA=" src="https://cdnjs.cloudflare.com/ajax/libs/require.js/2.3.4/require.min.js"></script>
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10 changes: 5 additions & 5 deletions master/_modules/sdcflows/interfaces/utils.html
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<meta name="viewport" content="width=device-width,initial-scale=1"/>
<meta name="color-scheme" content="light dark"><link rel="index" title="Index" href="../../../genindex.html" /><link rel="search" title="Search" href="../../../search.html" />

<!-- Generated with Sphinx 8.0.2 and Furo 2024.08.06 -->
<!-- Generated with Sphinx 8.1.3 and Furo 2024.08.06 -->
<title>sdcflows.interfaces.utils - sdcflows 0+unknown documentation</title>
<link rel="stylesheet" type="text/css" href="../../../_static/pygments.css?v=a746c00c" />
<link rel="stylesheet" type="text/css" href="../../../_static/styles/furo.css?v=354aac6f" />
Expand Down Expand Up @@ -357,7 +357,7 @@ <h1>Source code for sdcflows.interfaces.utils</h1><div class="highlight"><pre>
<span class="n">desc</span><span class="o">=</span><span class="s2">&quot;list of input data&quot;</span><span class="p">,</span>
<span class="p">)</span>
<span class="n">in_meta</span> <span class="o">=</span> <span class="n">InputMultiObject</span><span class="p">(</span>
<span class="n">traits</span><span class="o">.</span><span class="n">DictStrAny</span><span class="p">,</span>
<span class="n">traits</span><span class="o">.</span><span class="n">Dict</span><span class="p">(</span><span class="n">traits</span><span class="o">.</span><span class="n">Str</span><span class="p">),</span>
<span class="n">mandatory</span><span class="o">=</span><span class="kc">True</span><span class="p">,</span>
<span class="n">desc</span><span class="o">=</span><span class="s2">&quot;list of metadata&quot;</span><span class="p">,</span>
<span class="p">)</span>
Expand All @@ -368,12 +368,12 @@ <h1>Source code for sdcflows.interfaces.utils</h1><div class="highlight"><pre>
<span class="n">out_list</span> <span class="o">=</span> <span class="n">OutputMultiObject</span><span class="p">(</span>
<span class="n">traits</span><span class="o">.</span><span class="n">Tuple</span><span class="p">(</span>
<span class="n">File</span><span class="p">(</span><span class="n">exists</span><span class="o">=</span><span class="kc">True</span><span class="p">),</span>
<span class="n">traits</span><span class="o">.</span><span class="n">DictStrAny</span><span class="p">,</span>
<span class="n">traits</span><span class="o">.</span><span class="n">Dict</span><span class="p">(</span><span class="n">traits</span><span class="o">.</span><span class="n">Str</span><span class="p">),</span>
<span class="p">),</span>
<span class="n">desc</span><span class="o">=</span><span class="s2">&quot;list of output files&quot;</span><span class="p">,</span>
<span class="p">)</span>
<span class="n">out_data</span> <span class="o">=</span> <span class="n">OutputMultiObject</span><span class="p">(</span><span class="n">File</span><span class="p">(</span><span class="n">exists</span><span class="o">=</span><span class="kc">True</span><span class="p">))</span>
<span class="n">out_meta</span> <span class="o">=</span> <span class="n">OutputMultiObject</span><span class="p">(</span><span class="n">traits</span><span class="o">.</span><span class="n">DictStrAny</span><span class="p">)</span>
<span class="n">out_meta</span> <span class="o">=</span> <span class="n">OutputMultiObject</span><span class="p">(</span><span class="n">traits</span><span class="o">.</span><span class="n">Dict</span><span class="p">(</span><span class="n">traits</span><span class="o">.</span><span class="n">Str</span><span class="p">))</span>


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</aside>
</div>
</div><script src="../../../_static/documentation_options.js?v=27db1736"></script>
<script src="../../../_static/doctools.js?v=9a2dae69"></script>
<script src="../../../_static/doctools.js?v=9bcbadda"></script>
<script src="../../../_static/sphinx_highlight.js?v=dc90522c"></script>
<script src="../../../_static/scripts/furo.js?v=5fa4622c"></script>
<script crossorigin="anonymous" integrity="sha256-Ae2Vz/4ePdIu6ZyI/5ZGsYnb+m0JlOmKPjt6XZ9JJkA=" src="https://cdnjs.cloudflare.com/ajax/libs/require.js/2.3.4/require.min.js"></script>
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