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oesteban committed Mar 10, 2023
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62 changes: 62 additions & 0 deletions .mailmap
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Aaron Piccirilli <[email protected]>
Adam Huffman <[email protected]>
Adam Huffman <[email protected]> verdurin
Ariel Rokem <[email protected]>
Asier Erramuzpe <[email protected]>
Asier Erramuzpe <[email protected]> erramuzpe
Bennet Fauber <[email protected]>
Bennet Fauber <[email protected]> justbennet
Céline Provins <[email protected]>
Céline Provins <[email protected]> cprovins
Céline Provins <[email protected]> celprov
Céline Provins <[email protected]> <[email protected]>
Christopher J. Markiewicz <[email protected]>
Christopher J. Markiewicz <[email protected]> <[email protected]>
Christopher J. Markiewicz <[email protected]> <[email protected]>
Conrad Ma <[email protected]>
Conrad Ma <[email protected]> Conrad
Conrad Ma <[email protected]> 394822740
Conrad Ma <[email protected]> <[email protected]>
Conrad Ma <[email protected]> <[email protected]>
Dylan Nielson <[email protected]>
Dylan Nielson <[email protected]> Dylan <[email protected]>
Elodie Savary <[email protected]>
Elodie Savary <[email protected]> esavary
James D. Kent <[email protected]>
James D. Kent <[email protected]> <[email protected]>
James D. Kent <[email protected]> jdkent
James D. Kent <[email protected]> Fred Mertz <[email protected]>
Johannes Achtzehn <[email protected]>
Johannes Achtzehn <[email protected]> jAchtzehn
John A. Lee <[email protected]>
John A. Lee <[email protected]> john anthony lee
John A. Lee <[email protected]> leej3
Krzysztof J. Gorgolewski <[email protected]>
Krzysztof J. Gorgolewski <[email protected]> <[email protected]>
Krzysztof J. Gorgolewski <[email protected]> <filo@filo-dtc-laptop>
Krzysztof J. Gorgolewski <[email protected]> <filo@filo-Precision-M6500.(none)>
Krzysztof J. Gorgolewski <[email protected]> <filo@filo-Precision-M6500>
Krzysztof J. Gorgolewski <[email protected]> <filo@filolaptop>
Krzysztof J. Gorgolewski <[email protected]> <[email protected]>
Mathias Goncalves <[email protected]>
Mathias Goncalves <[email protected]> mathiasg
Mathias Goncalves <[email protected]> <[email protected]>
Mathias Goncalves <[email protected]> <[email protected]>
McKenzie P. Hagen <[email protected]>
McKenzie P. Hagen <[email protected]> mckenziephagen
Michael G. Clark <[email protected]>
Michael G. Clark <[email protected]> mgclark
Michael G. Clark <[email protected]> Michael Clark
Michael Krause <[email protected]>
Michael Krause <[email protected]> octomike
NiPreps Bot <[email protected]>
NiPreps Bot <[email protected]> nipreps-bot
Pablo Velasco <[email protected]>
Pablo Velasco <[email protected]> pvelasco
Patrick Sadil <[email protected]>
Patrick Sadil <[email protected]> psadil
Oscar Esteban <[email protected]>
Oscar Esteban <[email protected]> <[email protected]>
Ross Blair <[email protected]>
Ross Blair <[email protected]> <[email protected]>
William Triplett <[email protected]>
7 changes: 6 additions & 1 deletion .maint/CONTRIBUTORS.md
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Expand Up @@ -7,4 +7,9 @@ If you are new to the project, don't forget to add your name and affiliation to
Before every release, unlisted contributors will be invited again to add their names to this file (just in case they missed the automated message from our Welcome Bot).

| **Lastname** | **Name** | **Handle** | **ORCID** | **Affiliation** |
| --- | --- | --- | --- | --- |
| --- | --- | --- | --- | --- |
| Baratz | Zvi | @ZviBaratz | 0000-0001-7159-1387 | Sagol School of Neuroscience, Tel Aviv University, Tel Aviv, Israel |
| Blair | Ross W. | @rwblair | 0000-0003-3007-1056 | Department of Psychology, Stanford University, CA, USA |
| Goncalves | Mathias | @mgxd | 0000-0002-7252-7771 | Department of Psychology, Stanford University, CA, USA |
| Markiewicz | Christopher J. | @effigies | 0000-0002-6533-164X | Department of Psychology, Stanford University, CA, USA |
| Nielson | Dylan | @Shotgunosine | 0000-0003-4613-6643 | Section on Clinical and Computational Psychiatry, National Institute of Mental Health, Bethesda, MD, USA |
5 changes: 4 additions & 1 deletion .maint/FORMER.md
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Expand Up @@ -5,4 +5,7 @@ By adding your name to this list you are giving up on all your responsibilities
Should you desire to be considered back as a contributor or maintainer, please remove your name from this list and proceed as prescribed in the governance documents.

| **Lastname** | **Name** | **Handle** |
| --- | --- | --- |
| --- | --- | --- |
| Berleant | Shoshana | @shosber |
| Bot | NiPreps | @nipreps-bot |
| Gorgolewski | Krzysztof J. | @chrisgorgo |
11 changes: 6 additions & 5 deletions .maint/MAINTAINERS.md
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Expand Up @@ -7,8 +7,9 @@ If you are participating because of your affiliation with another organization (

<!-- EXAMPLE: The current contents of the table are given for an example, please update. -->

| **Lastname** | **Name** | **Handle** | **ORCID** | **Affiliation** | **Role** |
|--------------|----------|------------|---------------------|---------------------------------------------------------------------------------| --- |
| Provins | Céline | @celprov | 0000-0002-1668-9629 | Department of Radiology, Lausanne University Hospital and University of Lausanne, Switzerland | |
| Savary | Elodie | @esavary | 0000-0002-3896-6906 | Department of Radiology, Lausanne University Hospital and University of Lausanne, Switzerland | |

| **Lastname** | **Name** | **Handle** | **ORCID** | **Affiliation** | **Role** |
| --- | --- | --- | --- | --- | --- |
| Provins | Céline | @celprov | 0000-0002-1668-9629 | Department of Radiology, Lausanne University Hospital and University of Lausanne, Switzerland | |
| Savary | Elodie | @esavary | 0000-0002-3896-6906 | Department of Radiology, Lausanne University Hospital and University of Lausanne, Switzerland | |
| MacNicol | Eilidh | @eilidhmacnicol | 0000-0003-3715-7012 | Department of Neuroimaging, Institute of Psychiatry, Psychology and Neuroscience, King's College London, London, UK | AM (Advisory Member) |
| Esteban | Oscar | @oesteban | 0000-0001-8435-6191 | Lausanne University Hospital and University of Lausanne, Lausanne, Switzerland | |
4 changes: 2 additions & 2 deletions .maint/PIs.md
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Expand Up @@ -10,5 +10,5 @@ If you are participating because of your affiliation with another organization (

| **Lastname** | **Name** | **Handle** | **ORCID** | **Affiliation** | **Position** |
| --- | --- | --- | --- | --- | --- |
| Esteban | Oscar | @oesteban | 0000-0001-8435-6191 | Department of Radiology, Lausanne University Hospital and University of Lausanne | |
| Poldrack | Russell A. | @poldrack | 0000-0001-6755-0259 | Department of Psychology, Stanford University, CA, USA | -1 |
| Esteban | Oscar | @oesteban | 0000-0001-8435-6191 | Department of Radiology, Lausanne University Hospital and University of Lausanne | -1 |
| Poldrack | Russell A. | @poldrack | 0000-0001-6755-0259 | Department of Psychology, Stanford University, CA, USA | -2 |
77 changes: 77 additions & 0 deletions .zenodo.json
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{
"title": "NiReports: the NiPreps' reporting and visualization tools",
"description": "<p>The visual report system (VRS) of <em>NiPreps</em>.</p>",
"creators": [
{
"orcid": "0000-0001-8435-6191",
"affiliation": "Lausanne University Hospital and University of Lausanne, Lausanne, Switzerland",
"name": "Oscar Esteban"
},
{
"orcid": "0000-0002-3896-6906",
"affiliation": "Department of Radiology, Lausanne University Hospital and University of Lausanne, Switzerland",
"name": "Elodie Savary"
},
{
"orcid": "0000-0003-3715-7012",
"affiliation": "Department of Neuroimaging, Institute of Psychiatry, Psychology and Neuroscience, King's College London, London, UK",
"name": "Eilidh MacNicol"
},
{
"orcid": "0000-0002-1668-9629",
"affiliation": "Department of Radiology, Lausanne University Hospital and University of Lausanne, Switzerland",
"name": "C\u00e9line Provins"
}
],
"contributors": [
{
"orcid": "0000-0002-6533-164X",
"affiliation": "Department of Psychology, Stanford University, CA, USA",
"name": "Christopher J. Markiewicz",
"type": "Researcher"
},
{
"orcid": "0000-0001-7159-1387",
"affiliation": "Sagol School of Neuroscience, Tel Aviv University, Tel Aviv, Israel",
"name": "Zvi Baratz",
"type": "Researcher"
},
{
"orcid": "0000-0002-7252-7771",
"affiliation": "Department of Psychology, Stanford University, CA, USA",
"name": "Mathias Goncalves",
"type": "Researcher"
},
{
"orcid": "0000-0003-3007-1056",
"affiliation": "Department of Psychology, Stanford University, CA, USA",
"name": "Ross W. Blair",
"type": "Researcher"
},
{
"orcid": "0000-0003-4613-6643",
"affiliation": "Section on Clinical and Computational Psychiatry, National Institute of Mental Health, Bethesda, MD, USA",
"name": "Dylan Nielson",
"type": "Researcher"
},
{
"orcid": "0000-0001-8435-6191",
"affiliation": "Department of Radiology, Lausanne University Hospital and University of Lausanne",
"name": "Oscar Esteban",
"type": "Researcher"
},
{
"orcid": "0000-0001-6755-0259",
"affiliation": "Department of Psychology, Stanford University, CA, USA",
"name": "Russell A. Poldrack",
"type": "Researcher"
}
],
"keywords": [
"neuroimaging",
"visualization",
"nipreps"
],
"license": "Apache-2.0",
"upload_type": "software"
}
39 changes: 39 additions & 0 deletions CHANGES.rst
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23.0.0 (March 10, 2023)
=======================
The first OFFICIAL RELEASE of *NiReports* is out!
This first version of the package ports the visualization tools from *MRIQC* and *NiWorkflows* into a common API.
In addition, the plotting of mosaic views (*MRIQC*) is flexibilized so that rodent imaging can conveniently be also visualized.

CHANGES
-------
**Full Changelog**: https://github.com/nipreps/nireports/compare/0.2.0...23.0.0

* ENH: Flexibilize views of ``plot_mosaic`` to render nonhuman imaging by @oesteban in https://github.com/nipreps/nireports/pull/52
* ENH: Set up CI on CircleCI for artifact visualization by @esavary in https://github.com/nipreps/nireports/pull/50
* ENH: API refactor of *NiPype* interfaces by @oesteban in https://github.com/nipreps/nireports/pull/51
* MAINT: Updated ``MAINTAINERS.md`` by @esavary in https://github.com/nipreps/nireports/pull/49
* MAINT: Add Governance files (#48)


.. admonition:: Author list for papers based on *NiReports* 23.0 series

As described in the `Contributor Guidelines
<https://www.nipreps.org/community/CONTRIBUTING/#recognizing-contributions>`__,
anyone listed as developer or contributor may write and submit manuscripts
about *NiReports*.
To do so, please move the author(s) name(s) to the front of the following list:

Christopher J. Markiewicz \ :sup:`1`\ ; Zvi Baratz \ :sup:`2`\ ; Elodie Savary \ :sup:`3`\ ; Mathias Goncalves \ :sup:`1`\ ; Ross W. Blair \ :sup:`1`\ ; Eilidh MacNicol \ :sup:`4`\ ; Céline Provins \ :sup:`3`\ ; Dylan Nielson \ :sup:`5`\ ; Russell A. Poldrack \ :sup:`1`\ ; Oscar Esteban \ :sup:`6`\ .

Affiliations:

1. Department of Psychology, Stanford University, CA, USA
2. Sagol School of Neuroscience, Tel Aviv University, Tel Aviv, Israel
3. Department of Radiology, Lausanne University Hospital and University of Lausanne, Switzerland
4. Department of Neuroimaging, Institute of Psychiatry, Psychology and Neuroscience, King's College London, London, UK
5. Section on Clinical and Computational Psychiatry, National Institute of Mental Health, Bethesda, MD, USA
6. Department of Radiology, Lausanne University Hospital and University of Lausanne

Pre 23.0.0
==========
A number of pre-releases were launched before 23.0.0 to test the deployment and the integration tests.

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