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enh: comment code for maintainability
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oesteban authored Nov 3, 2024
1 parent fd66f7c commit 82e9f8b
Showing 1 changed file with 10 additions and 1 deletion.
11 changes: 10 additions & 1 deletion fmriprep/workflows/base.py
Original file line number Diff line number Diff line change
Expand Up @@ -580,9 +580,18 @@ def init_single_subject_wf(subject_id: str):
suffices = [s.suffix for s in estimator.sources]

if estimator.method == fm.EstimatorType.PEPOLAR:
# "Sophisticated" PEPOLAR schemes should be run "manually" with SDCFlows
# The following two cases are not considered sophisticated:
# 1. All PEPOLAR entities are the same modality
# (typically, more than two EPI PE directions), or
# 2. Two modalities are involved, with at most two images to pass
# into FSL TOPUP.
if (
len(set(suffices)) == 1
or (len(suffices) == 2 and all(suf in ('epi', 'bold', 'sbref') for suf in suffices))
or (
len(suffices) == 2
and all(suf in ('epi', 'bold', 'sbref') for suf in suffices)
)
):
wf_inputs = getattr(fmap_wf.inputs, f'in_{estimator.bids_id}')
wf_inputs.in_data = [str(s.path) for s in estimator.sources]
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