Denoise MNI152NLin6Asym:res-2

[tsalo]

Related to #39.

Changes proposed in this pull request

• Write out denoised MNI152NLin6Asym data. --output-spaces still isn't supported.

[codecov]

Codecov Report

Attention: Patch coverage is 0% with 10 lines in your changes missing coverage. Please review.

Project coverage is 31.18%. Comparing base (02654df) to head (0a2674a).
Report is 30 commits behind head on main.

Files with missing lines	Patch %	Lines
src/fmripost_aroma/workflows/base.py	0.00%	7 Missing ⚠️
src/fmripost_aroma/workflows/aroma.py	0.00%	3 Missing ⚠️

Additional details and impacted files

@@            Coverage Diff             @@
##             main      #40      +/-   ##
==========================================
+ Coverage   31.02%   31.18%   +0.15%     
==========================================
  Files          26       26              
  Lines        2166     2155      -11     
  Branches      329      327       -2     
==========================================
  Hits          672      672              
+ Misses       1474     1463      -11     
  Partials       20       20              

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[tsalo]

New tree:

.
├── dataset_description.json
├── logs
│   ├── CITATION.bib
│   ├── CITATION.html
│   ├── CITATION.md
│   └── CITATION.tex
├── sub-01
│   ├── ses-01
│   │   ├── figures
│   │   │   ├── sub-01_ses-01_task-rest_space-MNI152NLin6Asym_desc-about_bold.html
│   │   │   ├── sub-01_ses-01_task-rest_space-MNI152NLin6Asym_desc-aroma_bold.svg
│   │   │   ├── sub-01_ses-01_task-rest_space-MNI152NLin6Asym_desc-metrics_bold.svg
│   │   │   └── sub-01_ses-01_task-rest_space-MNI152NLin6Asym_desc-summary_bold.html
│   │   └── func
│   │       ├── sub-01_ses-01_task-rest_desc-aroma_metrics.json
│   │       ├── sub-01_ses-01_task-rest_desc-aroma_metrics.tsv
│   │       ├── sub-01_ses-01_task-rest_desc-melodic_timeseries.tsv
│   │       ├── sub-01_ses-01_task-rest_space-MNI152NLin6Asym_desc-aggrDenoised_bold.nii
│   │       ├── sub-01_ses-01_task-rest_space-MNI152NLin6Asym_desc-melodic_components.nii.gz
│   │       ├── sub-01_ses-01_task-rest_space-MNI152NLin6Asym_desc-melodic_mixing.tsv
│   │       ├── sub-01_ses-01_task-rest_space-MNI152NLin6Asym_desc-nonaggrDenoised_bold.nii
│   │       └── sub-01_ses-01_task-rest_space-MNI152NLin6Asym_desc-orthaggrDenoised_bold.nii
│   └── ses-02
│       ├── figures
│       │   ├── sub-01_ses-02_task-rest_space-MNI152NLin6Asym_desc-aroma_bold.svg
│       │   └── sub-01_ses-02_task-rest_space-MNI152NLin6Asym_desc-metrics_bold.svg
│       └── func
│           ├── sub-01_ses-02_task-rest_desc-aroma_metrics.json
│           ├── sub-01_ses-02_task-rest_desc-aroma_metrics.tsv
│           ├── sub-01_ses-02_task-rest_desc-melodic_timeseries.tsv
│           ├── sub-01_ses-02_task-rest_space-MNI152NLin6Asym_desc-aggrDenoised_bold.nii
│           ├── sub-01_ses-02_task-rest_space-MNI152NLin6Asym_desc-melodic_components.nii.gz
│           ├── sub-01_ses-02_task-rest_space-MNI152NLin6Asym_desc-melodic_mixing.tsv
│           ├── sub-01_ses-02_task-rest_space-MNI152NLin6Asym_desc-nonaggrDenoised_bold.nii
│           └── sub-01_ses-02_task-rest_space-MNI152NLin6Asym_desc-orthaggrDenoised_bold.nii
├── sub-01_anat.html
├── sub-01_ses-01_func.html
└── sub-01_ses-02_func.html

[tsalo]

Not sure why there's no res entity or why the files aren't compressed...

[effigies]

You probably need to set compress=True on the derivativesdatasink.

[tsalo]

Thanks!