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Drop task_id from collect_derivatives.
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tsalo committed May 7, 2024
1 parent 44c3d06 commit 5617d38
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Showing 2 changed files with 2 additions and 3 deletions.
2 changes: 1 addition & 1 deletion src/fmripost_aroma/utils/bids.py
Original file line number Diff line number Diff line change
Expand Up @@ -76,7 +76,7 @@ def collect_derivatives_old(
"""Collect preprocessing derivatives."""
subj_data = {
"bold_raw": "",
"" "bold_boldref": "",
"bold_boldref": "",
"bold_MNI152NLin6": "",
}
query = {
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3 changes: 1 addition & 2 deletions src/fmripost_aroma/workflows/base.py
Original file line number Diff line number Diff line change
Expand Up @@ -219,8 +219,7 @@ def init_single_subject_wf(subject_id: str):
subject_data = collect_derivatives(
config.execution.layout,
subject_id,
task=config.execution.task_id,
bids_filters=config.execution.bids_filters,
entities=config.execution.bids_filters,
)

if "flair" in config.workflow.ignore:
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